RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 FBXL13Q8NEE6 735 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 ACDQ96AP0 544 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 OTUB2Q96DC9 234 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 CYLDQ9NQC7 956 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 OSER1Q9NX31 292 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 RAB20Q9NX57 234 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 DCHS1Q96JQ0 3298 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 EML5Q05BV3 1969 aa16.55■□□□□ 0.24
CDH3-204ENST00000565453 A0A0A0MRY4 1105 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 PRR5-ARHGAP8B1AHC4 643 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 GREM1O60565 184 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 RPP40O75818 363 aaKnown RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 SMC2O95347 1197 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 ADH5P11766 374 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 ARHGAP8P85298 464 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 CBWD6Q4V339 395 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 CBWD3Q5JTY5 395 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 CBWD5Q5RIA9 395 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 PPP1R26Q5T8A7 1209 aaPredicted RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 SFTPA1Q8IWL2 248 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 BBS7Q8IWZ6 715 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 PHTF2Q8N3S3 785 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 TATDN2Q93075 761 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 KLF16Q9BXK1 252 aaPredicted RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 TLR8Q9NR97 1041 aaKnown RBP16.54■□□□□ 0.24
CDH3-204ENST00000565453 COQ4Q9Y3A0 265 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 CEP250Q9BV73 2442 aa16.54■□□□□ 0.24
CDH3-204ENST00000565453 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 AXIN1O15169 862 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 CYP26A1O43174 497 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 STX10O60499 249 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 TBX18O95935 607 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 ADH1CP00326 375 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 ACO1P21399 889 aaKnown RBP16.53■□□□□ 0.24
CDH3-204ENST00000565453 KIF11P52732 1056 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 RAD23BP54727 409 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 FKBP3Q00688 224 aaKnown RBP16.53■□□□□ 0.24
CDH3-204ENST00000565453 CSRP2Q16527 193 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 LY6G5CQ5SRR4 150 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 HTR3DQ70Z44 454 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 DGLUCYQ7Z3D6 616 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 ETFBKMTQ8IXQ9 262 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
CDH3-204ENST00000565453 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 PNKPQ96T60 521 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 TSG101Q99816 390 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 ARID3AQ99856 593 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 DUSP16Q9BY84 665 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 FAM124BQ9H5Z6 455 aaPredicted RBP16.53■□□□□ 0.24
CDH3-204ENST00000565453 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 SEMA4GQ9NTN9 838 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 EBF1Q9UH73 591 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 SH3BP1Q9Y3L3 701 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.53■□□□□ 0.24
CDH3-204ENST00000565453 USP3Q9Y6I4 520 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 MYH10P35580 1976 aa16.53■□□□□ 0.24
CDH3-204ENST00000565453 CACNA1AO00555 2505 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 HOXC11O43248 304 aaPredicted RBP16.52■□□□□ 0.24
CDH3-204ENST00000565453 APBB3O95704 486 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 IRF1P10914 325 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 SEC13P55735 322 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 MRPS21P82921 87 aaKnown RBP16.52■□□□□ 0.24
CDH3-204ENST00000565453 GAD2Q05329 585 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 SCD5Q86SK9 330 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 TTC39CQ8N584 583 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 LOXL4Q96JB6 756 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 ZC3H10Q96K80 434 aaKnown RBP16.52■□□□□ 0.24
CDH3-204ENST00000565453 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
CDH3-204ENST00000565453 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDH3-204ENST00000565453 MMP17Q9ULZ9 603 aa16.52■□□□□ 0.24
CDH3-204ENST00000565453 MYOFQ9NZM1 2061 aa16.52■□□□□ 0.23
CDH3-204ENST00000565453 WDR87Q6ZQQ6 2873 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 A0A1W2PQH9 124 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 EPN2O95208 641 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 KAT7O95251 611 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 APODP05090 189 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 CCDC192P0DO97 292 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 RARGP13631 454 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 HNRNPLP14866 589 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH3-204ENST00000565453 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
CDH3-204ENST00000565453 SDHBP21912 280 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 KIR2DL1P43626 348 aaPredicted RBP16.51■□□□□ 0.23
CDH3-204ENST00000565453 ATXN1P54253 815 aaKnown RBP16.51■□□□□ 0.23
CDH3-204ENST00000565453 DCAF17Q5H9S7 520 aaPredicted RBP16.51■□□□□ 0.23
CDH3-204ENST00000565453 TCERG1LQ5VWI1 586 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms