RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 C12orf29Q8N999 325 aa25.28■■□□□ 1.64
NME3-206ENST00000564252 DDX1Q92499 740 aaKnown RBP25.28■■□□□ 1.64
NME3-206ENST00000564252 OTUB2Q96DC9 234 aa25.28■■□□□ 1.64
NME3-206ENST00000564252 CNOT6LQ96LI5 555 aaKnown RBP25.28■■□□□ 1.64
NME3-206ENST00000564252 DUSP9Q99956 384 aaKnown RBP25.28■■□□□ 1.64
NME3-206ENST00000564252 INVSQ9Y283 1065 aa25.28■■□□□ 1.64
NME3-206ENST00000564252 RHOBTB3O94955 611 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 HNRNPLP14866 589 aaKnown RBP eCLIP25.27■■□□□ 1.64
NME3-206ENST00000564252 PIK3CAP42336 1068 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 SYKP43405 635 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 NDUFA8P51970 172 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 MAP3K7CLP57077 242 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 NFIL3Q16649 462 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 USP39Q53GS9 565 aaKnown RBP25.27■■□□□ 1.64
NME3-206ENST00000564252 TCEAL6Q6IPX3 200 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 PHTF2Q8N3S3 785 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 ALLCQ8N6M5 410 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 IL17RCQ8NAC3 791 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 MDGA1Q8NFP4 955 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 TCEAL3Q969E4 200 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 WBP2Q969T9 261 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 ARHGEF4Q9NR80 690 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 FAM49BQ9NUQ9 324 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 SH3BP1Q9Y3L3 701 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 MYH10P35580 1976 aa25.27■■□□□ 1.64
NME3-206ENST00000564252 GBP1P32455 592 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 GRIA2P42262 883 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 KIR2DL1P43626 348 aaPredicted RBP25.26■■□□□ 1.63
NME3-206ENST00000564252 VAMP7P51809 220 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 KRT85P78386 507 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 KDSRQ06136 332 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 STPG1Q5TH74 334 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 PMS2CLQ68D20 193 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 BBS7Q8IWZ6 715 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 ABCA7Q8IZY2 2146 aa25.26■■□□□ 1.63
NME3-206ENST00000564252 CHD8Q9HCK8 2581 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 BCLAF3A2AJT9 711 aaKnown RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 SGK1O00141 431 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 TLR5O60602 858 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 KIF20AO95235 890 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 KLF8O95600 359 aaPredicted RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 TIE1P35590 1138 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 CREB5Q02930 508 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 GAD2Q05329 585 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 INCA1Q0VD86 236 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 DPYDQ12882 1025 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 HSF5Q4G112 596 aaPredicted RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 EMC10Q5UCC4 262 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 C11orf74Q86VG3 221 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 ETFBKMTQ8IXQ9 262 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 TXNDC5Q8NBS9 432 aaKnown RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 TWNKQ96RR1 684 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 FBXO44Q9H4M3 255 aa25.25■■□□□ 1.63
NME3-206ENST00000564252 APOBEC3GQ9HC16 384 aaKnown RBP25.25■■□□□ 1.63
NME3-206ENST00000564252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.25■■□□□ 1.63
NME3-206ENST00000564252 HOXC11O43248 304 aaPredicted RBP25.24■■□□□ 1.63
NME3-206ENST00000564252 CAVIN2O95810 425 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 TRIM49P0CI25 452 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 TRIM49CP0CI26 452 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 IRF1P10914 325 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 BCKDHBP21953 392 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 NR2F2P24468 414 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 ADORA2BP29275 332 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 TNFRSF4P43489 277 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 CLEC20AQ6ZU45 233 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 GPRIN1Q7Z2K8 1008 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 OLIG1Q8TAK6 271 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 TLR8Q9NR97 1041 aaKnown RBP25.24■■□□□ 1.63
NME3-206ENST00000564252 SPHK2Q9NRA0 654 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 NUP205Q92621 2012 aa25.24■■□□□ 1.63
NME3-206ENST00000564252 HHLA1C9JL84 531 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 ADAM23O75077 832 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 FAM200BP0CF97 657 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 GCLMP48507 274 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 PPP3CAQ08209 521 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 INTS8Q75QN2 995 aaKnown RBP25.23■■□□□ 1.63
NME3-206ENST00000564252 TTC30AQ86WT1 665 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 NAT16Q8N8M0 369 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 TAS1R2Q8TE23 839 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 CCDC47Q96A33 483 aaKnown RBP25.23■■□□□ 1.63
NME3-206ENST00000564252 HNRNPABQ99729 332 aaKnown RBP25.23■■□□□ 1.63
NME3-206ENST00000564252 NACA2Q9H009 215 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 ZDHHC4Q9NPG8 344 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 MAPK8IP1Q9UQF2 711 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 THADAQ6YHU6 1953 aa25.23■■□□□ 1.63
NME3-206ENST00000564252 KMT2BQ9UMN6 2715 aaPredicted RBP25.23■■□□□ 1.63
NME3-206ENST00000564252 GREM1O60565 184 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 ALDH1A2O94788 518 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 TBX18O95935 607 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 EOGTQ5NDL2 527 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 TMEM25Q86YD3 366 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 FAM186BQ8IYM0 893 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 GUF1Q8N442 669 aaKnown RBP25.22■■□□□ 1.63
NME3-206ENST00000564252 KLF16Q9BXK1 252 aaPredicted RBP25.22■■□□□ 1.63
NME3-206ENST00000564252 IMPG2Q9BZV3 1241 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 CYP3A43Q9HB55 503 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 CYLDQ9NQC7 956 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 OSER1Q9NX31 292 aa25.22■■□□□ 1.63
NME3-206ENST00000564252 SCML2Q9UQR0 700 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms