RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 FAM35AQ86V20 835 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 RCOR2Q8IZ40 523 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 SIX6OS1Q8N1H7 587 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 TSEN2Q8NCE0 465 aaKnown RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 KRT35Q92764 455 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 ETNK1Q9HBU6 452 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 LRRC4Q9HBW1 653 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 KRT82Q9NSB4 513 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 RBM12Q9NTZ6 932 aaKnown RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 STIM2Q9P246 746 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 RAB21Q9UL25 225 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 NME7Q9Y5B8 376 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 C2CD4BA6NLJ0 364 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 HSF2BPO75031 334 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TADA2AO75478 443 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 DDHD2O94830 711 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 ALDH2P05091 517 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 RHOXF2BP0C7M4 288 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 H2AFXP16104 143 aaPredicted RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 ACAT1P24752 427 aaKnown RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 CHRNA3P32297 505 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 CYP2C18P33260 490 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PTPN7P35236 360 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PTPN9P43378 593 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 LBX1P52954 281 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 CCL23P55773 120 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 SMARCB1Q12824 385 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 DHX34Q14147 1143 aaKnown RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 GPNMBQ14956 572 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 NFE2Q16621 373 aaPredicted RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 ZFYVE27Q5T4F4 411 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 LLGL2Q6P1M3 1020 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TMCO3Q6UWJ1 677 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 DCP1BQ8IZD4 617 aaKnown RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM199Q8N511 208 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 EIF1ADQ8N9N8 165 aaKnown RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PCED1BQ96HM7 432 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 SCLYQ96I15 445 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PAWRQ96IZ0 340 aaKnown RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TBCBQ99426 244 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 RHOXF2Q9BQY4 288 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 PARD6BQ9BYG5 372 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 ANKZF1Q9H8Y5 726 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 ARFGAP3Q9NP61 516 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 DMAP1Q9NPF5 467 aaPredicted RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 CRTAC1Q9NQ79 661 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM51Q9NW97 253 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 FEZ2Q9UHY8 353 aaPredicted RBP10.16□□□□□ -0.78
UBFD1-202ENST00000563366 RASAL2Q9UJF2 1139 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 EFR3BQ9Y2G0 817 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
UBFD1-202ENST00000563366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 OR6C75A6NL08 312 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 FSCN2O14926 492 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 KIAA0355O15063 1070 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PAPSS1O43252 624 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PHF2O75151 1096 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 LRCH4O75427 683 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 BAIAP3O94812 1187 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 OAZ2O95190 189 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 TIMP1P01033 207 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 AMHP03971 560 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 KRT1P04264 644 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PYGMP11217 842 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 TIMP2P16035 220 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PDGFRAP16234 1089 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 TNFRSF8P28908 595 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 GBP1P32455 592 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 BRCC3P46736 316 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 MARCKSL1P49006 195 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 FNTAP49354 379 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 RGS7P49802 495 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF252P-AS1Q0IIN9 211 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF211Q13398 564 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 NAA30Q147X3 362 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PAN2Q504Q3 1202 aaKnown RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF280DQ6N043 979 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 FAM171BQ6P995 826 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 CLEC20AQ6ZU45 233 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 DEFB128Q7Z7B8 93 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 PIGZQ86VD9 579 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 VSIG1Q86XK7 387 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF280BQ86YH2 543 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 SLC13A5Q86YT5 568 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 SPATA2LQ8IUW3 424 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 IFT20Q8IY31 132 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 CRIPAKQ8N1N5 446 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 SCML4Q8N228 414 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 C12orf50Q8NA57 414 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms