RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 SRRDQ9UH36 339 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 PADI3Q9ULW8 664 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 FBXO21O94952 628 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ACSL3O95573 720 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ZSCAN5DPP0CG00 497 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 RBP3P10745 1247 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ODC1P11926 461 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ELNP15502 786 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 PECAM1P16284 738 aaPredicted RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 LSP1P33241 339 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 MAGEA4P43358 317 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 SCNN1GP51170 649 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 GRIK3Q13003 919 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ITGA7Q13683 1181 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 LPIN1Q14693 890 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 STAT4Q14765 748 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 CENPUQ71F23 418 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 PRCCQ92733 491 aaPredicted RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 P3H4Q92791 437 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 CCDC77Q9BR77 488 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 PPCSQ9HAB8 311 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 DDX43Q9NXZ2 648 aaKnown RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 NOD1Q9Y239 953 aa13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
AC055717.2-201ENST00000561864 A0A087WUV0 522 aaPredicted RBP13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 INPPL1O15357 1258 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 GNRH1P01148 92 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 IFNB1P01574 187 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 GHRP10912 638 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ETS1P14921 441 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 TSHRP16473 764 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 PCSK1P29120 753 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 RPL22P35268 128 aaKnown RBP13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 MATKP42679 507 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 CLCNKBP51801 687 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ACLYP53396 1101 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ADCY1Q08828 1119 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ADIGQ0VDE8 80 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 AUHQ13825 339 aaKnown RBP13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 KYNUQ16719 465 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 ANKRD20A8PQ5CZ79 823 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 MDH1BQ5I0G3 518 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 C4orf22Q6V702 233 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 TAOK1Q7L7X3 1001 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 METTL23Q86XA0 190 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 CLEC4CQ8WTT0 213 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 LPPQ93052 612 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 RTP4Q96DX8 246 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 SLC2A13Q96QE2 648 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 TSEN34Q9BSV6 310 aaKnown RBP13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 LRRC4Q9HBW1 653 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 CRTAC1Q9NQ79 661 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 LGALS13Q9UHV8 139 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 DSEQ9UL01 958 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 STAP1Q9ULZ2 295 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
AC055717.2-201ENST00000561864 BCLAF3A2AJT9 711 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 MGEA5O60502 916 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 ATP2C2O75185 946 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 CYP11A1P05108 521 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 IL4RP24394 825 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 NOS2P35228 1153 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 MMP13P45452 471 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms