RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OR52N2Q8NGI0 321 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 MBD3L2Q8NHZ7 208 aaPredicted RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 POC1BQ8TC44 478 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 TBC1D22AQ8WUA7 517 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 ST8SIA2Q92186 375 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 STAMQ92783 540 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 KCNN1Q92952 543 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 RNF125Q96EQ8 232 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 MCRS1Q96EZ8 462 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 RSRC1Q96IZ7 334 aaKnown RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 ZBTB45Q96K62 511 aaPredicted RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 HIST1H2AAQ96QV6 131 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 NEU1Q99519 415 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 TREX2Q9BQ50 279 aaPredicted RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 MECRQ9BV79 373 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 PTDSS2Q9BVG9 487 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 TRIM5Q9C035 493 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 RMI1Q9H9A7 625 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 HSFX1Q9UBD0 423 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 NDRG4Q9ULP0 352 aaKnown RBP3.53□□□□□ -1.84
TRAV28-201ENST00000557548 OAZ3Q9UMX2 235 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 USP22Q9UPT9 525 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 CLCA2Q9UQC9 943 aa3.53□□□□□ -1.84
TRAV28-201ENST00000557548 AATKQ6ZMQ8 1374 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC78A2IDD5 438 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 PI4KAP2A4QPH2 592 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 MROH6A6NGR9 719 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 FAM90A20PA6NIJ5 464 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ADM5C9JUS6 153 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 TOR1BO14657 336 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 FFAR3O14843 346 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 AHCYL1O43865 530 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 DOK2O60496 412 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 TSPAN3O60637 253 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 SUN1O94901 812 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 TFRCP02786 760 aaKnown RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CSF1RP07333 972 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CSF1P09603 554 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CR2P20023 1033 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ITGALP20701 1170 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 RBL1P28749 1068 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ADORA2AP29274 412 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 UQCRC1P31930 480 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 GGT5P36269 586 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 FHL3Q13643 280 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CSHL1Q14406 222 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ELAVL1Q15717 326 aaKnown RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 GPR68Q15743 365 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC96Q2M329 555 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CTXN3Q4LDR2 81 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ZNF484Q5JVG2 852 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CERCAMQ5T4B2 595 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ICE2Q659A1 982 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 DGAT2L7PQ6IED9 249 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 MFSD5Q6N075 450 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 MSANTD2Q6P1R3 559 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 DRICH1Q6PGQ1 229 aaPredicted RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 BRINP3Q76B58 766 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 PRRT2Q7Z6L0 340 aaPredicted RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 GALNT5Q7Z7M9 940 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ZNF761Q86XN6 746 aaPredicted RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 FSTL5Q8N475 847 aaPredicted RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ADAMTS15Q8TE58 950 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ZNF483Q8TF39 744 aaPredicted RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ZDHHC12Q96GR4 267 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 LRRC37BQ96QE4 947 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 WDR24Q96S15 920 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 PNKPQ96T60 521 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 TTPALQ9BTX7 342 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 PLA2G12BQ9BX93 195 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 REXO4Q9GZR2 422 aaKnown RBP3.52□□□□□ -1.85
TRAV28-201ENST00000557548 ANKEF1Q9NU02 776 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 NSMCE4AQ9NXX6 385 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CTTNBP2NLQ9P2B4 639 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 SERTAD3Q9UJW9 196 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 TTLL3Q9Y4R7 772 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 CYP46A1Q9Y6A2 500 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 LMTK3Q96Q04 1460 aa3.52□□□□□ -1.85
TRAV28-201ENST00000557548 A0A0U1RQG5 324 aaPredicted RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 SLC38A8A6NNN8 435 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ETV2O00321 342 aaPredicted RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 B4GALT3O60512 393 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TMEM63AO94886 807 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ADRB1P08588 477 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 KCNA2P16389 499 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 PPIFP30405 207 aaKnown RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 PRKAR1BP31321 381 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 HTR7P34969 479 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 KRT20P35900 424 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 PGM1P36871 562 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ZEB1P37275 1124 aaPredicted RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 STAT1P42224 750 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 MCM2P49736 904 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 GATMP50440 423 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ADAM17P78536 824 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 HSD11B2P80365 405 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 RNASELQ05823 741 aaKnown RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 CCNIQ14094 377 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms