RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 TFAP2BQ92481 460 aa16.95■□□□□ 0.3
SHMT2-232ENST00000557487 RTP4Q96DX8 246 aa16.95■□□□□ 0.3
SHMT2-232ENST00000557487 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
SHMT2-232ENST00000557487 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
SHMT2-232ENST00000557487 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.95■□□□□ 0.3
SHMT2-232ENST00000557487 C2CD2Q9Y426 696 aa16.95■□□□□ 0.3
SHMT2-232ENST00000557487 FAM237BA0A1B0GVD1 139 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 EME2A4GXA9 379 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 TRIM49D1C9J1S8 452 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 TRUB2O95900 331 aaKnown RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 SERPINB9P50453 376 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 SH3BGRP55822 239 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 CNTN2Q02246 1040 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 WASHC5Q12768 1159 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 DARS2Q6PI48 645 aaKnown RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 MTHFD1LQ6UB35 978 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 IGDCC3Q8IVU1 814 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 ZBTB10Q96DT7 871 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 FAM161BQ96MY7 647 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 FAM96AQ9H5X1 160 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 RPAP3Q9H6T3 665 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 KRT82Q9NSB4 513 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 PLA2G4CQ9UP65 541 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 OGTO15294 1046 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 SERPINA6P08185 405 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 ICAM3P32942 547 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 TMPRSS15P98073 1019 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 SMTNL2Q2TAL5 461 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 ZNF699Q32M78 642 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 STXBP5Q5T5C0 1151 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 DENND1BQ6P3S1 775 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 JOSD2Q8TAC2 188 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 FAF2Q96CS3 445 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 MIS12Q9H081 205 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 C12orf65Q9H3J6 166 aaKnown RBP16.94■□□□□ 0.3
SHMT2-232ENST00000557487 NDE1Q9NXR1 346 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 TTLL3Q9Y4R7 772 aa16.94■□□□□ 0.3
SHMT2-232ENST00000557487 FAM189A1O60320 539 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 C1QAP02745 245 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 ANPEPP15144 967 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 CNTFP26441 200 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 CRABP2P29373 138 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 ASPAP45381 313 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 GABRB2P47870 512 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 DSG1Q02413 1049 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 BST1Q10588 318 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 DYNC1I2Q13409 638 aaKnown RBP16.93■□□□□ 0.3
SHMT2-232ENST00000557487 XYLT1Q86Y38 959 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 MICALL2Q8IY33 904 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 MCUQ8NE86 351 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■□□□ 12.9
SHMT2-232ENST00000557487 PRR11Q96HE9 360 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-232ENST00000557487 FGD4Q96M96 766 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 GBP5Q96PP8 586 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 MTMR12Q9C0I1 747 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 VCX3BQ9H321 246 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 PPARGC1AQ9UBK2 798 aaKnown RBP16.93■□□□□ 0.3
SHMT2-232ENST00000557487 USP18Q9UMW8 372 aa16.93■□□□□ 0.3
SHMT2-232ENST00000557487 EIF4E1BA6NMX2 242 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 H3BRJ5 948 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 SNNO75324 88 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TNNC2P02585 160 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 MIPP30301 263 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 CRHR1P34998 444 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 RPL26P61254 145 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 XIAPP98170 497 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TEX44Q53QW1 395 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 KCNT1Q5JUK3 1230 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TTC7BQ86TV6 843 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 RBM15BQ8NDT2 890 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 DTX3LQ8TDB6 740 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 MCRS1Q96EZ8 462 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 CCDC106Q9BWC9 280 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 KLC2Q9H0B6 622 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 NRBP2Q9NSY0 501 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ENO1P06733 434 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 AOC1P19801 751 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TGM2P21980 687 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 OSBPP22059 807 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 YWHAZP63104 245 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 PDK2Q15119 407 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TIFABQ6ZNK6 161 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 NUDCD3Q8IVD9 361 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ULK2Q8IYT8 1036 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 PPP2R3CQ969Q6 453 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 TRIM4Q9C037 500 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 C10orf88Q9H8K7 445 aa16.92■□□□□ 0.3
SHMT2-232ENST00000557487 METTL5Q9NRN9 209 aaKnown RBP16.92■□□□□ 0.3
SHMT2-232ENST00000557487 ZC3H7BQ9UGR2 993 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms