RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MAK16Q9BXY0 300 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 FRMD8P1Q9BZ68 369 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 KCNK9Q9NPC2 374 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 MFHAS1Q9Y4C4 1052 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 EXOC1LA0A1B0GW35 172 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 ALOX15BO15296 676 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 RARBP10826 455 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 AKR1A1P14550 325 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 BRAFP15056 766 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 BASP1P80723 227 aaKnown RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 MRPS6P82932 125 aaKnown RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 IFT88Q13099 833 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 STAT4Q14765 748 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 HIF1AQ16665 826 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 NBPF20Q3BBV1 942 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 SV2CQ496J9 727 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 FAXCQ5TGI0 409 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 C6orf89Q6UWU4 347 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 CENPUQ71F23 418 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 GDAP1Q8TB36 358 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 TRIB2Q92519 343 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 MAML1Q92585 1016 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 P3H4Q92791 437 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 PPP1R10Q96QC0 940 aaKnown RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 KCTD15Q96SI1 283 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 TBCBQ99426 244 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 C11orf84Q9BUA3 381 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 KIF9Q9HAQ2 790 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 XPO7Q9UIA9 1087 aaKnown RBP10.56□□□□□ -0.72
TMEM260-211ENST00000556648 Q9Y3F1 56 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 HEY1Q9Y5J3 304 aa10.56□□□□□ -0.72
TMEM260-211ENST00000556648 FAM155AB1AL88 458 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 APOL1O14791 398 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CDH16O75309 829 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 SSTR1P30872 391 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 MLH1P40692 756 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 LIG3P49916 1009 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CAP1Q01518 475 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 PKN2Q16513 984 aaKnown RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 BBS9Q3SYG4 887 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 GNASQ5JWF2 1037 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 OTUD1Q5VV17 481 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 IGDCC3Q8IVU1 814 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 PYROXD2Q8N2H3 581 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 AGGF1Q8N302 714 aaeCLIP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 NETO2Q8NC67 525 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 B3GALNT2Q8NCR0 500 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 GSTCDQ8NEC7 633 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 STK32AQ8WU08 396 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TTC25Q96NG3 672 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TMPRSS4Q9NRS4 437 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 MIOSQ9NXC5 875 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TRPV2Q9Y5S1 764 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 SCN10AQ9Y5Y9 1956 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CYB561D2O14569 222 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 KCNN4O15554 427 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 HUS1O60921 280 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 SPAG7O75391 227 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CHRNA1P02708 482 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CYBAP13498 195 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CYP2F1P24903 491 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 RBL1P28749 1068 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 PNPLA4P41247 253 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 RPL34P49207 117 aaKnown RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ARL4CP56559 192 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 GBE1Q04446 702 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ADIGQ0VDE8 80 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 PDK2Q15119 407 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 FAM47CQ5HY64 1035 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 SLC9A4Q6AI14 798 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 PAQR9Q6ZVX9 377 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 SLC26A9Q7LBE3 791 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 FUKQ8N0W3 1084 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 FBXO36Q8NEA4 188 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 GAD1Q99259 594 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 MTG1Q9BT17 334 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 DHX35Q9H5Z1 703 aaKnown RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 CCDC134Q9H6E4 229 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 GTF2IRD1Q9UHL9 959 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 ST3GAL5Q9UNP4 418 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 TIMM13Q9Y5L4 95 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-211ENST00000556648 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
TMEM260-211ENST00000556648 XPOTO43592 962 aaKnown RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 VIMP08670 466 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms