RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 APOBEC3GQ9HC16 384 aaKnown RBP23.91■■□□□ 1.42
ACTN1-220ENST00000556433 KAT7O95251 611 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 APODP05090 189 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 ZNF806P0C7X5 589 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 FAM200BP0CF97 657 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 EIF2DP41214 584 aaKnown RBP23.9■■□□□ 1.42
ACTN1-220ENST00000556433 PGFP49763 221 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 MRPS21P82921 87 aaKnown RBP23.9■■□□□ 1.42
ACTN1-220ENST00000556433 AASDHQ4L235 1098 aaPredicted RBP23.9■■□□□ 1.42
ACTN1-220ENST00000556433 C12orf40Q86WS4 652 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 OTUB2Q96DC9 234 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 TWNKQ96RR1 684 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 HNRNPABQ99729 332 aaKnown RBP23.9■■□□□ 1.42
ACTN1-220ENST00000556433 CYP3A43Q9HB55 503 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 MMP17Q9ULZ9 603 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 PCDHGA5Q9Y5G8 931 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 SPAG17Q6Q759 2223 aa23.9■■□□□ 1.42
ACTN1-220ENST00000556433 RHOBTB1O94844 696 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 GAD2Q05329 585 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 INCA1Q0VD86 236 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 MESP2Q0VG99 397 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 ELF2Q15723 593 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 SFTPA1Q8IWL2 248 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 CYFIP2Q96F07 1278 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 NT5C1AQ9BXI3 368 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 GDPD2Q9HCC8 539 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 ARHGEF4Q9NR80 690 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 TLR8Q9NR97 1041 aaKnown RBP23.89■■□□□ 1.41
ACTN1-220ENST00000556433 INVSQ9Y283 1065 aa23.89■■□□□ 1.41
ACTN1-220ENST00000556433 A0A0A0MRY4 1105 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.88■■□□□ 1.41
ACTN1-220ENST00000556433 TLR5O60602 858 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 IRF1P10914 325 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 TIE1P35590 1138 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 GRIA2P42262 883 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 KDSRQ06136 332 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 ENPEPQ07075 957 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 USP39Q53GS9 565 aaKnown RBP23.88■■□□□ 1.41
ACTN1-220ENST00000556433 ANO7Q6IWH7 933 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 TTC30AQ86WT1 665 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 BBS7Q8IWZ6 715 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 CCDC150Q8NCX0 1101 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 WBP2Q969T9 261 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 JAKMIP2Q96AA8 810 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 TPSD1Q9BZJ3 242 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 NIF3L1Q9GZT8 377 aa23.88■■□□□ 1.41
ACTN1-220ENST00000556433 MYOFQ9NZM1 2061 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 TBX18O95935 607 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 CD58P19256 250 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 GBP1P32455 592 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 CRY1Q16526 586 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 PLA2G2CQ5R387 149 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 EMC10Q5UCC4 262 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 BTBD8Q5XKL5 378 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 CLEC20AQ6ZU45 233 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 GPRIN1Q7Z2K8 1008 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 ALLCQ8N6M5 410 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 NAT16Q8N8M0 369 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 TXNDC5Q8NBS9 432 aaKnown RBP23.87■■□□□ 1.41
ACTN1-220ENST00000556433 CCDC34Q96HJ3 373 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 SMOC1Q9H4F8 434 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 TMEM8AQ9HCN3 771 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 SCML2Q9UQR0 700 aa23.87■■□□□ 1.41
ACTN1-220ENST00000556433 KLF8O95600 359 aaPredicted RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 ACO1P21399 889 aaKnown RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 MPLP40238 635 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 TNFRSF4P43489 277 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 ANO4Q32M45 955 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 ZCWPW2Q504Y3 356 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 KRT39Q6A163 491 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 TMEM92Q6UXU6 159 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 RASSF3Q86WH2 238 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 TMEM25Q86YD3 366 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 SMYD4Q8IYR2 804 aaPredicted RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 IL17RCQ8NAC3 791 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 WHAMMQ8TF30 809 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 CNOT6LQ96LI5 555 aaKnown RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 DUSP9Q99956 384 aaKnown RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 KLF16Q9BXK1 252 aaPredicted RBP23.86■■□□□ 1.41
ACTN1-220ENST00000556433 DNAI2Q9GZS0 605 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 SPHK2Q9NRA0 654 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 VPS45Q9NRW7 570 aa23.86■■□□□ 1.41
ACTN1-220ENST00000556433 TBC1D3BA6NDS4 549 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 HHLA1C9JL84 531 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 HOXC11O43248 304 aaPredicted RBP23.85■■□□□ 1.41
ACTN1-220ENST00000556433 CILPO75339 1184 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 GTF2H1P32780 548 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 ATP5C1P36542 298 aaKnown RBP23.85■■□□□ 1.41
ACTN1-220ENST00000556433 KIR2DL1P43626 348 aaPredicted RBP23.85■■□□□ 1.41
ACTN1-220ENST00000556433 CREB5Q02930 508 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 EDRF1Q3B7T1 1238 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 HSF5Q4G112 596 aaPredicted RBP23.85■■□□□ 1.41
ACTN1-220ENST00000556433 PPM1JQ5JR12 505 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 IL31Q6EBC2 164 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 EEF2KMTQ96G04 330 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 RXFP3Q9NSD7 469 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 OSER1Q9NX31 292 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 MYO16Q9Y6X6 1858 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 EML5Q05BV3 1969 aa23.85■■□□□ 1.41
ACTN1-220ENST00000556433 SGK1O00141 431 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms