RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ZP2Q05996 745 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 GOLGA8FQ08AF8 430 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 GOLGA8DPQ0D2H9 430 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 ARID5BQ14865 1188 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 CLEC16AQ2KHT3 1053 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 HECTD3Q5T447 861 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 HGSNATQ68CP4 663 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 VPS36Q86VN1 386 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
SNX6-206ENST00000556162 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
SNX6-206ENST00000556162 GOLGA1Q92805 767 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 SYT11Q9BT88 431 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 ABHD10Q9NUJ1 306 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 VCANP13611 3396 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 A0A0C4DFX4 3053 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 TRAV19A0A0A6YYK7 116 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 C2orf78A6NCI8 922 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 LOC730098B7Z3J9 87 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 RALAP11233 206 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 UNGP13051 313 aaPredicted RBP14.86□□□□□ -0.03
SNX6-206ENST00000556162 PFKLP17858 780 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 HDCP19113 662 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 NSFP46459 744 aaKnown RBP14.86□□□□□ -0.03
SNX6-206ENST00000556162 YWHAGP61981 247 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNX6-206ENST00000556162 PTPN20Q4JDL3 420 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 POTEHQ6S545 545 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.86□□□□□ -0.03
SNX6-206ENST00000556162 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 ZDHHC14Q8IZN3 488 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 CMTM8Q8IZV2 173 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 C18orf8Q96DM3 657 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 NMUR1Q9HB89 426 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 CLIC5Q9NZA1 410 aa14.86□□□□□ -0.03
SNX6-206ENST00000556162 YJEFN3A6XGL0 299 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 E7ENQ6 273 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
SNX6-206ENST00000556162 TLR5O60602 858 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 CKMP06732 381 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 RARGP13631 454 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 PGFP49763 221 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 TUBP50607 506 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 BTBD8Q5XKL5 378 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 OR6B2Q6IFH4 312 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 TADA2BQ86TJ2 420 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 ZDHHC17Q8IUH5 632 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 ARID3BQ8IVW6 561 aaPredicted RBP14.85□□□□□ -0.03
SNX6-206ENST00000556162 SLC30A5Q8TAD4 765 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 CLEC4CQ8WTT0 213 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 ASB16Q96NS5 453 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNX6-206ENST00000556162 NACA2Q9H009 215 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 PATJQ8NI35 1801 aa14.85□□□□□ -0.03
SNX6-206ENST00000556162 ZNF638Q14966 1978 aaKnown RBP14.85□□□□□ -0.03
SNX6-206ENST00000556162 FAM170AA1A519 330 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 OAS1P00973 400 aaKnown RBP14.84□□□□□ -0.03
SNX6-206ENST00000556162 ERBB2P04626 1255 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 WEE1P30291 646 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 GABRB2P47870 512 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 CENPCQ03188 943 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 BSPRYQ5W0U4 402 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 PPP1R2P3Q6NXS1 205 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 WDR59Q6PJI9 974 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 MTSS1LQ765P7 747 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 BHLHA9Q7RTU4 235 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ARL14EPQ8N8R7 260 aaPredicted RBP14.84□□□□□ -0.03
SNX6-206ENST00000556162 TC2NQ8N9U0 490 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 CDK5RAP1Q96SZ6 601 aaKnown RBP14.84□□□□□ -0.03
SNX6-206ENST00000556162 CCSER2Q9H7U1 834 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNX6-206ENST00000556162 OSER1Q9NX31 292 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ARHGAP20Q9P2F6 1191 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 IMPACTQ9P2X3 320 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ADAMTS1Q9UHI8 967 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 GOLGA6L6A8MZA4 724 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 PLEKP08567 350 aaPredicted RBP14.84□□□□□ -0.03
SNX6-206ENST00000556162 MMP8P22894 467 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ATP5C1P36542 298 aaKnown RBP14.84□□□□□ -0.03
SNX6-206ENST00000556162 MRE11P49959 708 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 TOGARAM2Q6ZUX3 1019 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ZNF276Q8N554 614 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 SPC24Q8NBT2 197 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 FAM149B1Q96BN6 582 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 SLC22A12Q96S37 553 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 RNF38Q9H0F5 515 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 TRPV4Q9HBA0 871 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ZFP14Q9HCL3 533 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 ADAM22Q9P0K1 906 aa14.84□□□□□ -0.03
SNX6-206ENST00000556162 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
SNX6-206ENST00000556162 TMCO5BA8MYB1 307 aa14.83□□□□□ -0.04
SNX6-206ENST00000556162 DDX3XO00571 662 aaKnown RBP eCLIP14.83□□□□□ -0.046e-10■■■■■ 32.8
SNX6-206ENST00000556162 DPYSL4O14531 572 aa14.83□□□□□ -0.04
SNX6-206ENST00000556162 COCHO43405 550 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms