RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
SHMT2-221ENST00000555773 FAM183BPQ6ZVS7 135 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 TMC8Q8IU68 726 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-221ENST00000555773 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
SHMT2-221ENST00000555773 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 THAP2Q9H0W7 228 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 S1PR5Q9H228 398 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 KCNF1Q9H3M0 494 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 IL21Q9HBE4 155 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 CLIC5Q9NZA1 410 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 ZMYM5Q9UJ78 669 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 E7ENQ6 273 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 HSF2BPO75031 334 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 LTFP02788 710 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 RHOP08100 348 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 CCDC175P0C221 793 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 RALAP11233 206 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 PFKLP17858 780 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 ABCB4P21439 1286 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 TUBP50607 506 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 VAV2P52735 878 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 MAMLD1Q13495 774 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 TCEAL1Q15170 157 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 C2CD6Q53TS8 623 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 FAM102AQ5T9C2 384 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 BTBD8Q5XKL5 378 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 DNAJC24Q6P3W2 148 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 EP400NLQ6ZTU2 488 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 PDZD4Q76G19 769 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 BHLHA9Q7RTU4 235 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 SCD5Q86SK9 330 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 RHOT2Q8IXI1 618 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 FAM149B1Q96BN6 582 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 MSLNLQ96KJ4 702 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 RIPOR3Q96MK2 946 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 GCNAQ96QF7 691 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 POPDC2Q9HBU9 364 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 ZNF334Q9HCZ1 680 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 GMIPQ9P107 970 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 TMEM59LQ9UK28 342 aa13.07□□□□□ -0.32
SHMT2-221ENST00000555773 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
SHMT2-221ENST00000555773 A0A0A6YYK5 440 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 GOLGA8SH3BPF8 625 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 PJA2O43164 708 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 TBX10O75333 385 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 MYL4P12829 197 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 GABRR2P28476 465 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 MTHFRP42898 656 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 DLX2Q07687 328 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 KLHDC10Q6PID8 442 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 GAREM2Q75VX8 874 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 DNAAF5Q86Y56 855 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 FEZF2Q8TBJ5 459 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 NDRG1Q92597 394 aaKnown RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 MRPS31Q92665 395 aaKnown RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 SLC2A13Q96QE2 648 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 PACSIN1Q9BY11 444 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 WDR6Q9NNW5 1121 aaKnown RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
SHMT2-221ENST00000555773 HCFC1R1Q9NWW0 138 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 MYO1AQ9UBC5 1043 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 COG5Q9UP83 839 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 CLUHO75153 1309 aa13.06□□□□□ -0.32
SHMT2-221ENST00000555773 FAM170AA1A519 330 aa13.05□□□□□ -0.32
SHMT2-221ENST00000555773 TMEM191CA6NGB0 347 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms