RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TMEM110-MUSTN1A8MSY1 372 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ESPNB1AK53 854 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 PAPSS1O43252 624 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 SOAT2O75908 522 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 MTA2O94776 668 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 NCAM1P13591 858 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ATF6P18850 670 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 PSMA2P25787 234 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 CDC25CP30307 473 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 GBP1P32455 592 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 MAN1A1P33908 653 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 IRS1P35568 1242 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 SLC1A1P43005 524 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 SSR1P43307 286 aaKnown RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 YWHAGP61981 247 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ACAP1Q15027 740 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 HADHQ16836 314 aaKnown RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ARHGAP15Q53QZ3 475 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 C2CD6Q53TS8 623 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 LLGL2Q6P1M3 1020 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ARCQ7LC44 396 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 GPRIN1Q7Z2K8 1008 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 SPRED2Q7Z698 418 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 RBM23Q86U06 439 aaKnown RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 FNIP1Q8TF40 1166 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 GIPC2Q8TF65 315 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ARHGEF26Q96DR7 871 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 C16orf45Q96MC5 204 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHMT2-220ENST00000555634 ZMYM5Q9UJ78 669 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 HCFC2Q9Y5Z7 792 aa11.73□□□□□ -0.53
SHMT2-220ENST00000555634 MYO9BQ13459 2157 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 HHLA1C9JL84 531 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 BUB1O43683 1085 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 ZMYND10O75800 440 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SEC24AO95486 1093 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 ABL1P00519 1130 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 POU2F2P09086 479 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SPATA31D3P0C874 917 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PDGFRAP16234 1089 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 MATKP42679 507 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 GPR15P49685 360 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SULT1E1P49888 294 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 GNG11P61952 73 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 MTA1Q13330 715 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 MESDQ14696 234 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 DCAF6Q58WW2 860 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF569Q5MCW4 686 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 ZFYVE27Q5T4F4 411 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PM20D1Q6GTS8 502 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SPATA31D4Q6ZUB0 917 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-220ENST00000555634 BEND5Q7L4P6 421 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PEX26Q7Z412 305 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PHLDB2Q86SQ0 1253 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SCAMP5Q8TAC9 235 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 SERPINB11Q96P15 392 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 CNPY3Q9BT09 278 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 TTLL2Q9BWV7 592 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 A0A0C4DFX4 3053 aa11.72□□□□□ -0.53
SHMT2-220ENST00000555634 CLUHO75153 1309 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 MIF4GDA9UHW6 222 aaKnown RBP11.71□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF197O14709 1029 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TNFRSF10BO14763 440 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 PER2O15055 1255 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CCL16O15467 120 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 GRAP2O75791 330 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 MOCS3O95396 460 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 F9P00740 461 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 EPCAMP16422 314 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 PTPN2P17706 415 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 IGFBP4P22692 258 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 NOS2P35228 1153 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CETN2P41208 172 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 PTPN9P43378 593 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TUBP50607 506 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 KPNA1P52294 538 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF143P52747 638 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TAF10Q12962 218 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CAMK1Q14012 370 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 ARL13BQ3SXY8 428 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CES5AQ6NT32 575 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 LILRA6Q6PI73 481 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 DNAAF5Q86Y56 855 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CORO1BQ9BR76 489 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms