RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RFX8Q6ZV50 586 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 RAB11FIP4Q86YS3 637 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 IZUMO1Q8IYV9 350 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 JPH3Q8WXH2 748 aaPredicted RBP3.88□□□□□ -1.79
SRP54-207ENST00000555535 HES6Q96HZ4 224 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 CES2O00748 559 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 SLC16A6O15403 523 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 LDB3O75112 727 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 USP12O75317 370 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 FTLP02792 175 aaPredicted RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 ARRB2P32121 409 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 MLH1P40692 756 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 VIPR2P41587 438 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 COPB1P53618 953 aaKnown RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 DEPDC1Q5TB30 811 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 THEMIS2Q5TEJ8 643 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 USP45Q70EL2 814 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 MIER2Q8N344 545 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 SPEM1Q8N4L4 309 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 CELF5Q8N6W0 485 aaKnown RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 LINC01465Q8N7H1 131 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 PRPF38AQ8NAV1 312 aaKnown RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 PCSK9Q8NBP7 692 aaKnown RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 NEUROG1Q92886 237 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 HS6ST2Q96MM7 605 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 LMBRD1Q9NUN5 540 aa3.87□□□□□ -1.79
SRP54-207ENST00000555535 FEZ2Q9UHY8 353 aaPredicted RBP3.87□□□□□ -1.79
SRP54-207ENST00000555535 hCG_1984214I3L0E3 225 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 ZC3H11AO75152 810 aaKnown RBP eCLIP3.86□□□□□ -1.79
SRP54-207ENST00000555535 UNC5CO95185 931 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 GKP32189 559 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 NKX6-1P78426 367 aaPredicted RBP3.86□□□□□ -1.79
SRP54-207ENST00000555535 PSG6Q00889 435 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 AMPD3Q01432 767 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 LMAN2Q12907 356 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 PLS1Q14651 629 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 KCNB1Q14721 858 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 CC2D1BQ5T0F9 858 aaKnown RBP3.86□□□□□ -1.79
SRP54-207ENST00000555535 PTCHD4Q6ZW05 846 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 CATIPQ7Z7H3 387 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 ABRAQ8N0Z2 381 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 BCAS4Q8TDM0 211 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 SF3B5Q9BWJ5 86 aaKnown RBP3.86□□□□□ -1.79
SRP54-207ENST00000555535 PLSCR4Q9NRQ2 329 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 PNPOQ9NVS9 261 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 MRPS17Q9Y2R5 130 aaKnown RBP3.86□□□□□ -1.79
SRP54-207ENST00000555535 WASHC2CQ9Y4E1 1318 aa3.86□□□□□ -1.79
SRP54-207ENST00000555535 AKAP10O43572 662 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 EPN2O95208 641 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 CSF1RP07333 972 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 POU2F2P09086 479 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 CYP2C9P11712 490 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 APEHP13798 732 aaKnown RBP3.85□□□□□ -1.79
SRP54-207ENST00000555535 POLD2P49005 469 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 FAM110CQ1W6H9 321 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 AWAT1Q58HT5 328 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 EMC10Q5UCC4 262 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 RBM23Q86U06 439 aaKnown RBP3.85□□□□□ -1.79
SRP54-207ENST00000555535 RBM38Q9H0Z9 239 aaKnown RBP3.85□□□□□ -1.79
SRP54-207ENST00000555535 TMEM45AQ9NWC5 275 aa3.85□□□□□ -1.79
SRP54-207ENST00000555535 EVPLQ92817 2033 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 H3BUI4 141 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 PMPCBO75439 489 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 NDUFB8O95169 186 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 TCEA1P23193 301 aaKnown RBP3.84□□□□□ -1.79
SRP54-207ENST00000555535 CCND1P24385 295 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 CXCR3P49682 368 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 MRGPRG-AS1Q2M3A8 158 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 SLC39A5Q6ZMH5 540 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 ZNF280BQ86YH2 543 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 MAFAQ8NHW3 353 aaPredicted RBP3.84□□□□□ -1.79
SRP54-207ENST00000555535 ELP5Q8TE02 316 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 IGFBPL1Q8WX77 278 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 ASPSCR1Q9BZE9 553 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 PCDHA6Q9UN73 950 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 PLEKHM1Q9Y4G2 1056 aa3.84□□□□□ -1.79
SRP54-207ENST00000555535 TLX3O43711 291 aaPredicted RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 GRPP07492 148 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 RECQLP46063 649 aaPredicted RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 P2RX3P56373 397 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 SOX8P57073 446 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 YPEL5P62699 121 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 PPATQ06203 517 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 MYO1EQ12965 1108 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 LY6KQ17RY6 165 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 ZIK1Q3SY52 487 aaPredicted RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 DCAF12L1Q5VU92 463 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 DPY19L3Q6ZPD9 716 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 TRAPPC11Q7Z392 1133 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 HIC2Q96JB3 615 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 FAM167AQ96KS9 214 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 SMAD5Q99717 465 aaKnown RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 GTPBP4Q9BZE4 634 aaKnown RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 C6orf106Q9H6K1 298 aaPredicted RBP3.83□□□□□ -1.8
SRP54-207ENST00000555535 SBNO2Q9Y2G9 1366 aa3.83□□□□□ -1.8
SRP54-207ENST00000555535 INPPL1O15357 1258 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 TMPRSS11DO60235 418 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 PAPSS2O95340 614 aaPredicted RBP3.82□□□□□ -1.8
SRP54-207ENST00000555535 VNN1O95497 513 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms