RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 RTKNQ9BST9 563 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 FAM167BQ9BTA0 163 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR11Q9BZH6 1224 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 EPS8L2Q9H6S3 715 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 SAYSD1Q9NPB0 183 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 NKX1-2Q9UD57 310 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 M0R3H8 397 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 EXOC5O00471 708 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 KIAA0355O15063 1070 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 MPPED1O15442 326 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 DNPH1O43598 174 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 PRKCBP05771 671 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 IL6RP08887 468 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 FOLR3P41439 243 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 DGCR2P98153 550 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 BMPR2Q13873 1038 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 ST3GAL2Q16842 350 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 TIGD6Q17RP2 521 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 LSM12Q3MHD2 195 aaKnown RBP6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 SLC44A2Q8IWA5 706 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 C11orf44Q8N8P7 122 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 R3HDM4Q96D70 268 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 PBKQ96KB5 322 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 Q96MF0 132 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 HAPLN3Q96S86 360 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR27A2RRH5 827 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR47O94967 919 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 VNN1O95497 513 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 FESP07332 822 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 CHRM2P08172 466 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 DLDP09622 509 aaKnown RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 ZFXP17010 805 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 PAX3P23760 479 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 CST5P28325 142 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 HTR7P34969 479 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 AVPR1BP47901 424 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 CLCN2P51788 898 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 EIF4A1P60842 406 aaKnown RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 AP2B1P63010 937 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 TAP1Q03518 808 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 POU5F1BQ06416 359 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 CSHL1Q14406 222 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 ACOX1Q15067 660 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 PLAC9Q5JTB6 97 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 RINT1Q6NUQ1 792 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 RINLQ6ZS11 566 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 RAB11FIP2Q7L804 512 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 SUPT20HQ8NEM7 779 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 XAGE5Q8WWM1 108 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 ZSCAN31Q96LW9 406 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 MLST8Q9BVC4 326 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 DPCDQ9BVM2 203 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 PABPC3Q9H361 631 aaKnown RBP6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 PRDM8Q9NQV8 689 aa6.25□□□□□ -1.41
CKS1BP1-201ENST00000555221 HMX3A6NHT5 357 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 A8MVJ9 347 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 LMNAP02545 664 aaKnown RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 TMEM225BP0DP42 221 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 HKR1P10072 659 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 MAKP20794 623 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 YY1P25490 414 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 DGKQP52824 942 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 PDE1AP54750 535 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 TPTEP56180 551 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 SUMO2P61956 95 aaKnown RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 ADCK5Q3MIX3 580 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 ALFQ53S48 1182 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 Q6ZNX1 250 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 PRRT2Q7Z6L0 340 aaPredicted RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 NGDNQ8NEJ9 315 aaKnown RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 VPS50Q96JG6 964 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 COQ10AQ96MF6 247 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 DDX23Q9BUQ8 820 aaKnown RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 MLXIPQ9HAP2 919 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 ITM2CQ9NQX7 267 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 KIF17Q9P2E2 1029 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 LPAR3Q9UBY5 353 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 SRP68Q9UHB9 627 aaKnown RBP6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 MAST3O60307 1309 aa6.24□□□□□ -1.41
CKS1BP1-201ENST00000555221 CCDC151A5D8V7 595 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 EFCAB8A8MWE9 144 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 DHHO43323 396 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 ERBB2P04626 1255 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 TGM1P22735 817 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 KLRK1P26718 216 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 AKT1P31749 480 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 GKP32189 559 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 GSTM5P46439 218 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 FHL3Q13643 280 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 GRM4Q14833 912 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 TAF5Q15542 800 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 TXNRD1Q16881 649 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 TRIM60Q495X7 471 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 ANKRD45Q5TZF3 282 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms