RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 BCKDHBP21953 392 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 PI4KAP42356 2102 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 SLC6A11P48066 632 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 PGFP49763 221 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 PDE6CP51160 858 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
SHMT2-215ENST00000554656 CLDN10P78369 228 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 IFRD2Q12894 506 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-215ENST00000554656 NR1H3Q13133 447 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 DHCR24Q15392 516 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 KNOP1Q1ED39 458 aaKnown RBP11.22□□□□□ -0.61
SHMT2-215ENST00000554656 GON4LQ3T8J9 2241 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 STPG1Q5TH74 334 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF658Q5TYW1 1059 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-215ENST00000554656 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 ADGRG2Q8IZP9 1017 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 C12orf50Q8NA57 414 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-215ENST00000554656 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 PARD3BQ8TEW8 1205 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 MMP17Q9ULZ9 603 aa11.22□□□□□ -0.61
SHMT2-215ENST00000554656 ASCC3Q8N3C0 2202 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 COCHO43405 550 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 EXOC3O60645 756 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ABL1P00519 1130 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 C4BPAP04003 597 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 MBL2P11226 248 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 BMP6P22004 513 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 KCNA4P22459 653 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 YWHAQP27348 245 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ATICP31939 592 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 PPP3CCP48454 512 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 DGKEP52429 567 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 DLG4P78352 724 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 MYL5Q02045 173 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 STK4Q13043 487 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ORC1Q13415 861 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 TRPC3Q13507 836 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF699Q32M78 642 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 C1orf220Q5T0J3 134 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 EMC10Q5UCC4 262 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 PMS2CLQ68D20 193 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 LUZP1Q86V48 1076 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 NUP93Q8N1F7 819 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 KIAA1958Q8N8K9 716 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 MDGA1Q8NFP4 955 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 TSTD1Q8NFU3 115 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 FBXO32Q969P5 355 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 EXOC4Q96A65 974 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 KCTD10Q9H3F6 313 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 CCSER2Q9H7U1 834 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ZDHHC4Q9NPG8 344 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 IL37Q9NZH6 218 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 GMIPQ9P107 970 aa11.21□□□□□ -0.61
SHMT2-215ENST00000554656 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.61
SHMT2-215ENST00000554656 ADAMTS9Q9P2N4 1935 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 SGK1O00141 431 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ADAM23O75077 832 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 BEST1O76090 585 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 KLF8O95600 359 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ZDHHC11BP0C7U3 371 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 CCDC130P13994 396 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 PMLP29590 882 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 KIR2DL1P43626 348 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-215ENST00000554656 SLC5A3P53794 718 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 CREB5Q02930 508 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 KDSRQ06136 332 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 BIRC3Q13489 604 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 STIM1Q13586 685 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 NCOA4Q13772 614 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ELF2Q15723 593 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 CRY1Q16526 586 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 LY6G5CQ5SRR4 150 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 N4BP2L1Q5TBK1 243 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-215ENST00000554656 IL31Q6EBC2 164 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ANO7Q6IWH7 933 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 FOXR2Q6PJQ5 311 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ACOT1Q86TX2 421 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ETFBKMTQ8IXQ9 262 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 IL17RCQ8NAC3 791 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 OLIG1Q8TAK6 271 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
SHMT2-215ENST00000554656 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 SMOQ99835 787 aa11.2□□□□□ -0.62
SHMT2-215ENST00000554656 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms