RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SUMO2P61956 95 aaKnown RBP5.99□□□□□ -1.45
SCFD1-211ENST00000554437 L1TD1Q5T7N2 865 aaKnown RBP5.99□□□□□ -1.45
SCFD1-211ENST00000554437 FAXCQ5TGI0 409 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 FBXO38Q6PIJ6 1188 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 USP17L6PQ6QN14 398 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 NAPRTQ6XQN6 538 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 ZNF804AQ7Z570 1209 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 SKAP1Q86WV1 359 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 BOLLQ8N9W6 283 aaKnown RBP5.99□□□□□ -1.45
SCFD1-211ENST00000554437 FSD1LQ9BXM9 530 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 ARFGAP3Q9NP61 516 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 TMOD4Q9NZQ9 345 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 NKX1-2Q9UD57 310 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-211ENST00000554437 RIMKLBQ9ULI2 386 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 KAT6AQ92794 2004 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 KCNQ3O43525 872 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 CCNT2O60583 730 aaKnown RBP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 TJP3O95049 919 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 PDE8BO95263 885 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 IGLV2-14P01704 120 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 CD19P15391 556 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 GABRB3P28472 473 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 RBL1P28749 1068 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 HSPA7P48741 367 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 ELLP55199 621 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 MPEG1Q2M385 716 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 DGKKQ5KSL6 1271 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 CEP85Q6P2H3 762 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 FBXO42Q6P3S6 717 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 MTHFD1LQ6UB35 978 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 KIAA0408Q6ZU52 694 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 USP49Q70CQ1 688 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 CCDC28AQ8IWP9 274 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 FSTL5Q8N475 847 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 METTL25Q8N6Q8 603 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 GLIS1Q8NBF1 620 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 TBC1D5Q92609 795 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 ZDHHC12Q96GR4 267 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 LENG8Q96PV6 779 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 PCDHAC1Q9H158 963 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 PRDM13Q9H4Q3 707 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 STEAP1Q9UHE8 339 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 VPS51Q9UID3 782 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 ADAM21Q9UKJ8 722 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 AMFRQ9UKV5 643 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 ZMYND8Q9ULU4 1186 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-211ENST00000554437 SLC27A6Q9Y2P4 619 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 WNT6Q9Y6F9 365 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 SPATA31A6Q5VVP1 1343 aa5.98□□□□□ -1.45
SCFD1-211ENST00000554437 FAM234BA2RU67 622 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 PODXLO00592 558 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 CREB1P16220 341 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 HTR3AP46098 478 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 RHBDL3P58872 404 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 GPS1Q13098 491 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 GRM1Q13255 1194 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SMN1Q16637 294 aaKnown RBP5.97□□□□□ -1.45
SCFD1-211ENST00000554437 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.97□□□□□ -1.45
SCFD1-211ENST00000554437 RAP1GAP2Q684P5 730 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 MRNIPQ6NTE8 343 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 TOGARAM2Q6ZUX3 1019 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 RD3Q7Z3Z2 195 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SYTL1Q8IYJ3 562 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SAMD3Q8N6K7 520 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SARAFQ96BY9 339 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 BBC3Q96PG8 261 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-211ENST00000554437 PSMD1Q99460 953 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 GDF15Q99988 308 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SELENOOQ9BVL4 669 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 TRIM36Q9NQ86 728 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 RGL1Q9NZL6 768 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 SH3BP4Q9P0V3 963 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 ARPP21Q9UBL0 812 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-211ENST00000554437 CDC23Q9UJX2 597 aa5.97□□□□□ -1.45
SCFD1-211ENST00000554437 M0R3H8 397 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 HNRNPDLO14979 420 aaKnown RBP5.96□□□□□ -1.46
SCFD1-211ENST00000554437 SETSIPP0DME0 302 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 FPR3P25089 353 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 CYP4F2P78329 520 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 PTCHD4Q6ZW05 846 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 ADGRG3Q86Y34 549 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 KRT73Q86Y46 540 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 FAM98AQ8NCA5 519 aaKnown RBP5.96□□□□□ -1.46
SCFD1-211ENST00000554437 MBD3L2Q8NHZ7 208 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-211ENST00000554437 ABHD5Q8WTS1 349 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 SLC39A13Q96H72 371 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 MACROD1Q9BQ69 325 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 R3HDMLQ9H3Y0 253 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 MGAT4CQ9UBM8 478 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 LPAR3Q9UBY5 353 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 DAAM1Q9Y4D1 1078 aa5.96□□□□□ -1.46
SCFD1-211ENST00000554437 COL11A2P13942 1736 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-211ENST00000554437 LRRC3CA6NJW4 275 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 ZNF213O14771 459 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 SPRY2O43597 315 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 EXOC3O60645 756 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 C1QL1O75973 258 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 JTBO76095 146 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 FGAP02671 866 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms