RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DNAI2Q9GZS0 605 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 KRT82Q9NSB4 513 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 SMPD4Q9NXE4 827 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CHMP5Q9NZZ3 219 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CFAP97Q9P2B7 532 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 MMP17Q9ULZ9 603 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 DYNC1LI1Q9Y6G9 523 aaKnown RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 DNAH14Q0VDD8 3507 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ADAMTS9Q9P2N4 1935 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 HOXC11O43248 304 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 AP1G2O75843 785 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 RHOBTB1O94844 696 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 KAT7O95251 611 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 APODP05090 189 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 FAM200BP0CF97 657 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 ADH5P11766 374 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 KRT13P13646 458 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 HOXC13P31276 330 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PSMC2P35998 433 aaKnown RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 GRIA2P42262 883 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PIK3CAP42336 1068 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 TNFRSF4P43489 277 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PXNP49023 591 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PSEN1P49768 467 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 DGKEP52429 567 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 NDST1P52848 882 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 GAD2Q05329 585 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 IFRD2Q12894 506 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 ELF2Q15723 593 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 CRY1Q16526 586 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PLK5Q496M5 336 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 ZCWPW2Q504Y3 356 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 LY6G5CQ5SRR4 150 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 KLHDC10Q6PID8 442 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 RHBDF2Q6PJF5 856 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 KBTBD6Q86V97 674 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 ETFBKMTQ8IXQ9 262 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 FAM186BQ8IYM0 893 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 ZNF276Q8N554 614 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 SPRYD3Q8NCJ5 442 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC150Q8NCX0 1101 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 TTC16Q8NEE8 873 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 TSTD1Q8NFU3 115 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 SCAMP5Q8TAC9 235 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 SLC2A14Q8TDB8 520 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PNKPQ96T60 521 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 NT5C1AQ9BXI3 368 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 NIF3L1Q9GZT8 377 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 TMEM8AQ9HCN3 771 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 CYLDQ9NQC7 956 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 TLR8Q9NR97 1041 aaKnown RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 VPS45Q9NRW7 570 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 HMGXB4Q9UGU5 601 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 CHORDC1Q9UHD1 332 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 SCML2Q9UQR0 700 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 SH3BP1Q9Y3L3 701 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 PCDHA5Q9Y5H7 936 aa6.99□□□□□ -1.29
SLIRP-203ENST00000554074 MAP1BP46821 2468 aaKnown RBP6.99□□□□□ -1.29
SLIRP-203ENST00000554074 HHLA1C9JL84 531 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 STX10O60499 249 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 TLR5O60602 858 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CILPO75339 1184 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 BEST1O76090 585 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 ALDH1A2O94788 518 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CLSTN1O94985 981 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 ZNF202O95125 648 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC130P13994 396 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 MPLP40238 635 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 KIR2DL1P43626 348 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 PPP3CAQ08209 521 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 GOLGA8FQ08AF8 430 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 GOLGA8DPQ0D2H9 430 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 ADAM9Q13443 819 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 AASDHQ4L235 1098 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 USP39Q53GS9 565 aaKnown RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 COBLL1Q53SF7 1204 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 C2orf27AQ580R0 203 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 EOGTQ5NDL2 527 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 BTBD8Q5XKL5 378 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 PMS2CLQ68D20 193 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 KRT39Q6A163 491 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 SPOPLQ6IQ16 392 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CLEC20AQ6ZU45 233 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 NUDT18Q6ZVK8 323 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 HTR3DQ70Z44 454 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 TRMT11Q7Z4G4 463 aaKnown RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 C12orf40Q86WS4 652 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 C12orf29Q8N999 325 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 C12orf50Q8NA57 414 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 IL17RCQ8NAC3 791 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 OLIG1Q8TAK6 271 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 TAS1R2Q8TE23 839 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 WHAMMQ8TF30 809 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CYFIP2Q96F07 1278 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 KLF16Q9BXK1 252 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 GTPBP4Q9BZE4 634 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 354.7 ms