RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 SENP8Q96LD8 212 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 MYH6P13533 1939 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 AGRPO00253 132 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 KIAA0391O15091 583 aaKnown RBP11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 MEFVO15553 781 aaPredicted RBP11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 ITGB6P18564 788 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 AP3M2P53677 418 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 SV2CQ496J9 727 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC39A12Q504Y0 691 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 RAB6CQ53S08 254 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 FAM171A1Q5VUB5 890 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 POLNQ7Z5Q5 900 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 IFNEQ86WN2 208 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 ATPAF2Q8N5M1 289 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 ELOVL4Q9GZR5 314 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 RAB6CQ9H0N0 254 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 ST3GAL5Q9UNP4 418 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 A0A1W2PPM1 405 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 CCL22O00626 93 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 MAP2K7O14733 419 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 AXIN1O15169 862 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 VNN1O95497 513 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 SYT15Q9BQS2 421 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 TSPAN8P19075 237 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 ATP4AP20648 1035 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 OLIG2Q13516 323 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 LCA5Q86VQ0 697 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 EPAS1Q99814 870 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 STARD7Q9NQZ5 370 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 PRLRP16471 622 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 PPIL2Q13356 520 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF235Q14590 738 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 FBXO48Q5FWF7 155 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 DCAF12L1Q5VU92 463 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC17A6Q9P2U8 582 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 COL4A1P02462 1669 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 MAPK13O15264 365 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 OPHN1O60890 802 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 ERVK-10P10266 1014 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 XPAP23025 273 aaPredicted RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 ADRA1DP25100 572 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 MGAT1P26572 445 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 KIF19Q2TAC6 998 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 TMTC4Q5T4D3 741 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 UBAP2Q5T6F2 1119 aaKnown RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 NIPA1Q7RTP0 329 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 PIP4K2CQ8TBX8 421 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 CCHCR1Q8TD31 782 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 RGS17Q9UGC6 210 aaPredicted RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 CD4P01730 458 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 COPS2P61201 443 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 QPCTQ16769 361 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 HSP90AA5PQ58FG0 334 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 SGO1Q5FBB7 561 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 PMF1Q6P1K2 205 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 C16orf59Q7L2K0 433 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 HES6Q96HZ4 224 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 SENP6Q9GZR1 1112 aaPredicted RBP11.18□□□□□ -0.62
TGFBR1-209ENST00000552516 A6NNZ2 444 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 DNAJC6O75061 913 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TTC4O95801 387 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 YWHAHQ04917 246 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TUBB8Q3ZCM7 444 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 MECRQ9BV79 373 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TSSK1BQ9BXA7 367 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 GDF3Q9NR23 364 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 MPP6Q9NZW5 540 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PTAR1Q7Z6K3 402 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PPIL6Q8IXY8 311 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TFB1MQ8WVM0 346 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ELMO2Q96JJ3 720 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 SNRNP25Q9BV90 132 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 IARS2Q9NSE4 1012 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 NID2Q14112 1375 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 FZD9O00144 591 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 DDX3YO15523 660 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ASS1P00966 412 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 HNRNPH3P31942 346 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 FAAP100Q0VG06 881 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms