RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MON1AQ86VX9 555 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 PHF13Q86YI8 300 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-206ENST00000550406 NPAS3Q8IXF0 933 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 FGF13Q92913 245 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
RAB5C-206ENST00000550406 GZMAP12544 262 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 MMP8P22894 467 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 PPP3CCP48454 512 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 CDK17Q00537 523 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 TAF5Q15542 800 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 MMS22LQ6ZRQ5 1243 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 XYLT1Q86Y38 959 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 SIX6OS1Q8N1H7 587 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 PANX2Q96RD6 677 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 CYP2S1Q96SQ9 504 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 TLR8Q9NR97 1041 aaKnown RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 SEPT11Q9NVA2 429 aaKnown RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 CDH7Q9ULB5 785 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 CEP83Q9Y592 693 aa13.7□□□□□ -0.22
RAB5C-206ENST00000550406 KIF26AQ9ULI4 1882 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-206ENST00000550406 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 TCRBV5S1A1TA0A578 114 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 C2CD4DB7Z1M9 353 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 FBXO21O94952 628 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 ABL1P00519 1130 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 OAS1P00973 400 aaKnown RBP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 YWHAGP61981 247 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 OR6B2Q6IFH4 312 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 PHLDB2Q86SQ0 1253 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 ZNF276Q8N554 614 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 C18orf8Q96DM3 657 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 NHEJ1Q9H9Q4 299 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAB5C-206ENST00000550406 NAGPAQ9UK23 515 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 NUDT5Q9UKK9 219 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 USTQ9Y2C2 406 aa13.69□□□□□ -0.22
RAB5C-206ENST00000550406 LOC730098B7Z3J9 87 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ZNF263O14978 683 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 COCHO43405 550 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 RTN2O75298 545 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 OLFM2O95897 454 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 TBX18O95935 607 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 LTFP02788 710 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 LAMP2P13473 410 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 RARGP13631 454 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 FCARP24071 287 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ZXDBP98169 803 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ZNF268Q14587 947 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 AAK1Q2M2I8 961 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ARL14EPQ8N8R7 260 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 RSPRY1Q96DX4 576 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 RPGRIP1Q96KN7 1286 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ZNHIT6Q9NWK9 470 aaKnown RBP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 CLIC5Q9NZA1 410 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.22
RAB5C-206ENST00000550406 GDE1Q9NZC3 331 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 ADAM22Q9P0K1 906 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
RAB5C-206ENST00000550406 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 SOBPA7XYQ1 873 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms