RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 APBB3O95704 486 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 KRT13P13646 458 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 HNRNPLP14866 589 aaKnown RBP eCLIP14.11□□□□□ -0.153e-8■■■■■ 29.5
CPSF6-204ENST00000547486 CD58P19256 250 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 TUBP50607 506 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 ENPEPQ07075 957 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 SF3A2Q15428 464 aaKnown RBP14.11□□□□□ -0.15
CPSF6-204ENST00000547486 PLK5Q496M5 336 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 LY6G5CQ5SRR4 150 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 TMEM25Q86YD3 366 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 PHTF2Q8N3S3 785 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 JAKMIP2Q96AA8 810 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 ACDQ96AP0 544 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 LOXL4Q96JB6 756 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 PNKPQ96T60 521 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 RTKNQ9BST9 563 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 NT5C1AQ9BXI3 368 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
CPSF6-204ENST00000547486 FBXO44Q9H4M3 255 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 NMUR1Q9HB89 426 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 TBC1D14Q9P2M4 693 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 CYP26A1O43174 497 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 TLR5O60602 858 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 EPN2O95208 641 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 KAT7O95251 611 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 ADH5P11766 374 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 GTF2H1P32780 548 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 PRCPP42785 496 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 EDRF1Q3B7T1 1238 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 KRT39Q6A163 491 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 TMEM92Q6UXU6 159 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 NAT16Q8N8M0 369 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 ENGASEQ8NFI3 743 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 ERCC4Q92889 916 aaPredicted RBP14.1□□□□□ -0.15
CPSF6-204ENST00000547486 TATDN2Q93075 761 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 KLF16Q9BXK1 252 aaPredicted RBP14.1□□□□□ -0.15
CPSF6-204ENST00000547486 NIF3L1Q9GZT8 377 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 SMOC1Q9H4F8 434 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 ZDHHC4Q9NPG8 344 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 NUDT5Q9UKK9 219 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 MMP17Q9ULZ9 603 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 SCML2Q9UQR0 700 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
CPSF6-204ENST00000547486 SGK1O00141 431 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 SLC30A4O14863 429 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 TRIM24O15164 1050 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ADH1CP00326 375 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 IRF1P10914 325 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ACO1P21399 889 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 TIE1P35590 1138 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 EIF2DP41214 584 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 KIR2DL1P43626 348 aaPredicted RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 DGKEP52429 567 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 PMS1P54277 932 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 MRPS21P82921 87 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 GAD2Q05329 585 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 KDSRQ06136 332 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 CRY1Q16526 586 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 PLA2G2CQ5R387 149 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 PPP1R26Q5T8A7 1209 aaPredicted RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ANKRD40Q6AI12 368 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 HTR3DQ70Z44 454 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 RASSF3Q86WH2 238 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ETFBKMTQ8IXQ9 262 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ALLCQ8N6M5 410 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 IL17RCQ8NAC3 791 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 TSTD1Q8NFU3 115 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 CCDC26Q8TAB7 109 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 NETO1Q8TDF5 533 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 OTUB2Q96DC9 234 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ARID3AQ99856 593 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 DUSP9Q99956 384 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 TPSD1Q9BZJ3 242 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 IMPG2Q9BZV3 1241 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 NACA2Q9H009 215 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 CYLDQ9NQC7 956 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 ARHGEF4Q9NR80 690 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 TLR8Q9NR97 1041 aaKnown RBP14.09□□□□□ -0.15
CPSF6-204ENST00000547486 SPHK2Q9NRA0 654 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 HCN2Q9UL51 889 aa14.09□□□□□ -0.15
CPSF6-204ENST00000547486 A0A1W2PQH9 124 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 MDM4O15151 490 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 CETN3O15182 167 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 HOXC11O43248 304 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-204ENST00000547486 ADAM23O75077 832 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 TULP3O75386 442 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 KLF8O95600 359 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-204ENST00000547486 APODP05090 189 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 ZNF806P0C7X5 589 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 ATP5C1P36542 298 aaKnown RBP14.08□□□□□ -0.16
CPSF6-204ENST00000547486 GRIA2P42262 883 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 TNFRSF4P43489 277 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms