RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	USP17L2	Q6R6M4	530 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	POTEG	Q6S5H5	508 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	DCDC5	Q6ZRR9	648 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	NLRX1	Q86UT6	975 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	NIPA2	Q8N8Q9	360 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	NAT8L	Q8N9F0	302 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	RP9	Q8TA86	221 aa	Known RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SLC35B2	Q8TB61	432 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF384	Q8TF68	577 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	DCAF4	Q8WV16	495 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	DDX1	Q92499	740 aa	Known RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	TTC17	Q96AE7	1141 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	RMND5B	Q96G75	393 aa	Predicted RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CCDC17	Q96LX7	622 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF597	Q96LX8	424 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	FAM111A	Q96PZ2	611 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	PRPF18	Q99633	342 aa	Known RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	BCL7B	Q9BQE9	202 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	PSD2	Q9BQI7	771 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF341	Q9BYN7	854 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GRIP2	Q9C0E4	1043 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	TRPC7	Q9HCX4	862 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CD320	Q9NPF0	282 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	HOMER2	Q9NSB8	354 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	DKK3	Q9UBP4	350 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SUCO	Q9UBS9	1254 aa	Known RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	DCDC2	Q9UHG0	476 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	MINPP1	Q9UNW1	487 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GIT1	Q9Y2X7	761 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	TTLL3	Q9Y4R7	772 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ABCA3	Q99758	1704 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	EMSY	Q7Z589	1322 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	LAMB2	P55268	1798 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF839	A8K0R7	811 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	PRR5-ARHGAP8	B1AHC4	643 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	CENPBD1	B2RD01	187 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120		H0YCG3	227 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120		H3BNH8	94 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GRIN3B	O60391	1043 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	OR6B1	O95007	311 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	NTSR2	O95665	410 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	LSM8	O95777	96 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	CALB1	P05937	261 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	KRT7	P08729	469 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	CYP2D6	P10635	497 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	PRKCH	P24723	683 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GABRB2	P47870	512 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	HNRNPF	P52597	415 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	NAA20	P61599	178 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	ARHGAP8	P85298	464 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	CNTN2	Q02246	1040 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TRAP1	Q12931	704 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TFDP1	Q14186	410 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	C16orf72	Q14CZ0	275 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TGFBI	Q15582	683 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TEX44	Q53QW1	395 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	KRT80	Q6KB66	452 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	OLFML1	Q6UWY5	402 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	AGMO	Q6ZNB7	445 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GPR180	Q86V85	440 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TTC30A	Q86WT1	665 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	SYNE4	Q8N205	404 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TTC30B	Q8N4P2	665 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	METTL25	Q8N6Q8	603 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	KY	Q8NBH2	561 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	FBXL13	Q8NEE6	735 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	PYDC1	Q8WXC3	89 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	ATG4A	Q8WYN0	398 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	NRBF2	Q96F24	287 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	PLEKHA8	Q96JA3	519 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GCNA	Q96QF7	691 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	RMDN3	Q96TC7	470 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GPATCH1	Q9BRR8	931 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TRIM56	Q9BRZ2	755 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	JMJD4	Q9H9V9	463 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	QPCTL	Q9NXS2	382 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	SLC17A7	Q9P2U7	560 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	IPO11	Q9UI26	975 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	APPL1	Q9UKG1	709 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	GNE	Q9Y223	722 aa	Known RBP	10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TSC22D4	Q9Y3Q8	395 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	TRIM17	Q9Y577	477 aa		10.54	□□□□□ -0.72
UBC-213	ENST00000546120	RGPD5	Q99666	1765 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	IGKV6D-41	A0A0C4DH26	115 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	WDR91	A4D1P6	747 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	RGSL1	A5PLK6	1076 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	TRIM64	A6NGJ6	449 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	GPR25	O00155	361 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	CYP26A1	O43174	497 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	IDH3B	O43837	385 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	MGEA5	O60502	916 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	GLRA3	O75311	464 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SLITRK3	O94933	977 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	STAMBP	O95630	424 aa		10.53	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms