RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.22	□□□□□ -0.61
NPIPB3-210	ENST00000542817	TFR2	Q9UP52	801 aa		11.22	□□□□□ -0.61
NPIPB3-210	ENST00000542817	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.22	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ANAPC1	Q9H1A4	1944 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	DOCK8	Q8NF50	2099 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817		A0A1W2PRU2	124 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	C2orf78	A6NCI8	922 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	EIF3CL	B5ME19	914 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	XYLB	O75191	536 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	RTN2	O75298	545 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	RTN3	O95197	1032 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	NDUFA10	O95299	355 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	OLFM2	O95897	454 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CEBPB	P17676	345 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	KCNA5	P22460	613 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	RRM1	P23921	792 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	GABRR2	P28476	465 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ACADSB	P45954	432 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	NSF	P46459	744 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	GALC	P54803	685 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ZXDB	P98169	803 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	SLC6A3	Q01959	620 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ITIH3	Q06033	890 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	IFRD2	Q12894	506 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	VEPH1	Q14D04	833 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CCDC122	Q5T0U0	273 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	OTUD1	Q5VV17	481 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	PLEKHA7	Q6IQ23	1121 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	TOGARAM2	Q6ZUX3	1019 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ITIH5	Q86UX2	942 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CCDC170	Q8IYT3	715 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	MAFA	Q8NHW3	353 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	IRGQ	Q8WZA9	623 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	FBXO32	Q969P5	355 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	VCPIP1	Q96JH7	1222 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CCDC42	Q96M95	316 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ZNF830	Q96NB3	372 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	EIF3C	Q99613	913 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	FBXO44	Q9H4M3	255 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	POMK	Q9H5K3	350 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	LRRC4	Q9HBW1	653 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	SEPT11	Q9NVA2	429 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	ADAM22	Q9P0K1	906 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CALCOCO1	Q9P1Z2	691 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	CD207	Q9UJ71	328 aa		11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	USP15	Q9Y4E8	981 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-210	ENST00000542817	OBSL1	O75147	1896 aa		11.21	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DENND4A	Q7Z401	1863 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ATMIN	O43313	823 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MBTPS2	O43462	519 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	AKR1B10	O60218	316 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FBXO21	O94952	628 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TBX18	O95935	607 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ABL1	P00519	1130 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	OAS1	P00973	400 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SCNN1A	P37088	669 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC8A3	P57103	927 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PITX1	P78337	314 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CYP4F8	P98187	520 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	OGDH	Q02218	1023 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TFF2	Q03403	129 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MAMLD1	Q13495	774 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZNF268	Q14587	947 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TSR1	Q2NL82	804 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LEXM	Q3ZCV2	418 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PABPC1L	Q4VXU2	614 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BSPRY	Q5W0U4	402 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TXNDC8	Q6A555	127 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC26A9	Q7LBE3	791 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BNIPL	Q7Z465	357 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MON1A	Q86VX9	555 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZNF276	Q8N554	614 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ACRBP	Q8NEB7	543 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	JOSD2	Q8TAC2	188 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RIN3	Q8TB24	985 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	OVCA2	Q8WZ82	227 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	HLA-C	Q95604	372 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZFR	Q96KR1	1074 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC2A13	Q96QE2	648 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC46A2	Q9BY10	475 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TRIM7	Q9C029	511 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RNF38	Q9H0F5	515 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	THAP2	Q9H0W7	228 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CCSER2	Q9H7U1	834 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ASAH2	Q9NR71	780 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ASNSD1	Q9NWL6	643 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SALL4	Q9UJQ4	1053 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CEP83	Q9Y592	693 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BDP1	A6H8Y1	2624 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DENND4C	Q5VZ89	1909 aa		11.2	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CLUH	O75153	1309 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GRAP2	O75791	330 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	IGLV3-25	P01717	112 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CYP1A2	P05177	515 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SRGAP2B	P0DMP2	458 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MYL4	P12829	197 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TFE3	P19532	575 aa	Predicted RBP	11.19	□□□□□ -0.62

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