RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 NDUFA2O43678 99 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RANBP6O60518 1105 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CTNND1O60716 968 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ADAM23O75077 832 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MFAP3LO75121 409 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 DCTN3O75935 186 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 UBOX5O94941 541 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RHOBTB3O94955 611 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PRLP01236 227 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KRT7P08729 469 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KRT5P13647 590 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 GYS1P13807 737 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RAG1P15918 1043 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ITGAXP20702 1163 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RRM1P23921 792 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PTGS2P35354 604 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KRT20P35900 424 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ASMTP46597 345 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NR2C2P49116 596 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 AK2P54819 239 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NR1H2P55055 460 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 P2RX3P56373 397 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TBX4P57082 545 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 VBP1P61758 197 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NRG1Q02297 640 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 EXOSC9Q06265 439 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SPAG1Q07617 926 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KLHL30Q0D2K2 578 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SMARCB1Q12824 385 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 IFRD2Q12894 506 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 COASYQ13057 564 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MED21Q13503 144 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KARSQ15046 597 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PKN2Q16513 984 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM266Q2M3C6 531 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 USP41Q3LFD5 358 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 Q3ZCU0 254 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC58Q4VC31 144 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ARSHQ5FYA8 562 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RBM20Q5T481 1227 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RESP18Q5W5W9 173 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SDE2Q6IQ49 451 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 BTNL9Q6UXG8 535 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 UNC5AQ6ZN44 842 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF704Q6ZNC4 412 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 DCDC5Q6ZRR9 648 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CYP4V2Q6ZWL3 525 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RHOUQ7L0Q8 258 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PTF1AQ7RTS3 328 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 DYMQ7RTS9 669 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FAM124AQ86V42 546 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 LRRTM3Q86VH5 581 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SPATA2LQ8IUW3 424 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NKAIN4Q8IVV8 208 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TRIM59Q8IWR1 403 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ADSSL1Q8N142 457 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ATAD1Q8NBU5 361 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 GIMAP8Q8ND71 665 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FAM13CQ8NE31 585 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PJA1Q8NG27 643 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TBC1D16Q8TBP0 767 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SSH1Q8WYL5 1049 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 BRF1Q92994 677 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 STMN2Q93045 179 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SYTL4Q96C24 671 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TLCD1Q96CP7 247 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM87BQ96K49 555 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TBATAQ96M53 351 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NLRP4Q96MN2 994 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PRICKLE1Q96MT3 831 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC43Q96MW1 224 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NOX5Q96PH1 765 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MMS19Q96T76 1030 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 DSCC1Q9BVC3 393 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM109Q9BVC6 243 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CEP41Q9BYV8 373 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FOXP3Q9BZS1 431 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 GLT8D2Q9H1C3 349 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 OR51B5Q9H339 312 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RAD21L1Q9H4I0 556 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NCOR1P1Q9H4R4 102 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ACAD9Q9H845 621 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SP140LQ9H930 580 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MARCH7Q9H992 704 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 NEK6Q9HC98 313 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SYTL2Q9HCH5 934 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 IL1RAPL2Q9NP60 686 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 LZTFL1Q9NQ48 299 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 POLE3Q9NRF9 147 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FANCLQ9NW38 375 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MRPL39Q9NYK5 338 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CLIC5Q9NZA1 410 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 HACD3Q9P035 362 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF69Q9UC07 566 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TJP2Q9UDY2 1190 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 FBXL5Q9UKA1 691 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RIMKLBQ9ULI2 386 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms