RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SH2D3AQ9BRG2 576 aa4.34□□□□□ -1.71
LEMD3-204ENST00000542032 CIPCQ9C0C6 399 aa4.34□□□□□ -1.71
LEMD3-204ENST00000542032 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
LEMD3-204ENST00000542032 CHST8Q9H2A9 424 aa4.34□□□□□ -1.71
LEMD3-204ENST00000542032 DKK4Q9UBT3 224 aa4.34□□□□□ -1.71
LEMD3-204ENST00000542032 CCNL1Q9UK58 526 aaPredicted RBP4.34□□□□□ -1.71
LEMD3-204ENST00000542032 SMIM35A0A1B0GVV1 85 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 BTBD19C9JJ37 291 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 H7C4K7 107 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 GOLIM4O00461 696 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 SPRY2O43597 315 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 EXOC3O60645 756 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 SRGAP2O75044 1071 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 BCAR3O75815 825 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 PTDSS1P48651 473 aaKnown RBP4.33□□□□□ -1.72
LEMD3-204ENST00000542032 LMAN2Q12907 356 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 SEMA5AQ13591 1074 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
LEMD3-204ENST00000542032 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
LEMD3-204ENST00000542032 TTC8Q8TAM2 541 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
LEMD3-204ENST00000542032 WDYHV1Q96HA8 205 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 C5orf34Q96MH7 638 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 FAM83DQ9H4H8 585 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 NRIP3Q9NQ35 241 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 USP22Q9UPT9 525 aa4.33□□□□□ -1.72
LEMD3-204ENST00000542032 VSTM5A8MXK1 200 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 H3BNC9 293 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 AGPSO00116 658 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PSMD9O00233 223 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 KIF3BO15066 747 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 MOSPD3O75425 235 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 USP1O94782 785 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 RHCEP18577 417 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 BTF3P20290 206 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PAX3P23760 479 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 ACVR2AP27037 513 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PEX2P28328 305 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PRKAR1BP31321 381 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 DIO1P49895 249 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 CPT1AP50416 773 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 SUMO2P61956 95 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 RHDQ02161 417 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 HSP90AB4PQ58FF6 505 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 DARS2Q6PI48 645 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 ZNF813Q6ZN06 617 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 CCDC149Q6ZUS6 474 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PNISRQ8TF01 805 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 CCDC136Q96JN2 1154 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 ZBTB45Q96K62 511 aaPredicted RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 FYTTD1Q96QD9 318 aaKnown RBP4.32□□□□□ -1.72
LEMD3-204ENST00000542032 STK31Q9BXU1 1019 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 BTBD1Q9H0C5 482 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 PDGFCQ9NRA1 345 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 OBP2AQ9NY56 170 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 VPS51Q9UID3 782 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 MID2Q9UJV3 735 aa4.32□□□□□ -1.72
LEMD3-204ENST00000542032 WDR17Q8IZU2 1322 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 GOLGA6CA6NDK9 693 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 GOLGA6BA6NDN3 693 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 UBE2Q2LH0YL09 131 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 CES2O00748 559 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 RASSF9O75901 435 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 RASAL1O95294 804 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 TOP3BO95985 862 aaKnown RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 MT-CO3P00414 261 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 PARP1P09874 1014 aaKnown RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 GOLGA6DP0CG33 693 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 ZKSCAN1P17029 563 aaPredicted RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 ATF7P17544 494 aaPredicted RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 RPL17P18621 184 aaKnown RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 ALDH5A1P51649 535 aaPredicted RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 HTRA4P83105 476 aaPredicted RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 SLC29A2Q14542 456 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 KIAA0753Q2KHM9 967 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 TMEM63BQ5T3F8 832 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 SYCP2LQ5T4T6 812 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 CACHD1Q5VU97 1274 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 KAZALD1Q96I82 304 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 ZNF668Q96K58 619 aaPredicted RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 ARNT2Q9HBZ2 717 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 GOLGA6AQ9NYA3 693 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 OGDHLQ9ULD0 1010 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 RIMKLBQ9ULI2 386 aa4.31□□□□□ -1.72
LEMD3-204ENST00000542032 SCAF8Q9UPN6 1271 aaKnown RBP4.31□□□□□ -1.72
LEMD3-204ENST00000542032 FRMPD2Q68DX3 1309 aaPredicted RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 AQP7P3A6NL99 342 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 A8MVJ9 347 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 E5RJQ4 531 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 FCHO1O14526 889 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 PIAS2O75928 621 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms