RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 KRT71Q3SY84 523 aa21.3■■□□□ 1
DDX55-205ENST00000538744 HIBCHQ6NVY1 386 aaPredicted RBP21.3■■□□□ 1
DDX55-205ENST00000538744 CEP128Q6ZU80 1094 aa21.3■■□□□ 1
DDX55-205ENST00000538744 PRUNE1Q86TP1 453 aa21.3■■□□□ 1
DDX55-205ENST00000538744 FAM35AQ86V20 835 aa21.3■■□□□ 1
DDX55-205ENST00000538744 HOOK3Q86VS8 718 aa21.3■■□□□ 1
DDX55-205ENST00000538744 SIX6OS1Q8N1H7 587 aa21.3■■□□□ 1
DDX55-205ENST00000538744 GLIS1Q8NBF1 620 aa21.3■■□□□ 1
DDX55-205ENST00000538744 MYCBPAPQ8TBZ2 947 aa21.3■■□□□ 1
DDX55-205ENST00000538744 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.3■■□□□ 1
DDX55-205ENST00000538744 RNF157Q96PX1 679 aa21.3■■□□□ 1
DDX55-205ENST00000538744 DSEQ9UL01 958 aa21.3■■□□□ 1
DDX55-205ENST00000538744 ZNF487B1APH4 448 aa21.29■■□□□ 1
DDX55-205ENST00000538744 MCF2LO15068 1137 aa21.29■■□□□ 1
DDX55-205ENST00000538744 DAB1O75553 588 aa21.29■■□□□ 1
DDX55-205ENST00000538744 CYP11A1P05108 521 aa21.29■■□□□ 1
DDX55-205ENST00000538744 TFE3P19532 575 aaPredicted RBP21.29■■□□□ 1
DDX55-205ENST00000538744 CHKAP35790 457 aa21.29■■□□□ 1
DDX55-205ENST00000538744 MATKP42679 507 aa21.29■■□□□ 1
DDX55-205ENST00000538744 MAP3K7CLP57077 242 aa21.29■■□□□ 1
DDX55-205ENST00000538744 EIF3EP60228 445 aaKnown RBP21.29■■□□□ 1
DDX55-205ENST00000538744 MRPS5P82675 430 aaKnown RBP21.29■■□□□ 1
DDX55-205ENST00000538744 ADCY1Q08828 1119 aa21.29■■□□□ 1
DDX55-205ENST00000538744 GPS1Q13098 491 aa21.29■■□□□ 1
DDX55-205ENST00000538744 ZC3H12AQ5D1E8 599 aaKnown RBP21.29■■□□□ 1
DDX55-205ENST00000538744 ERMARDQ5T6L9 678 aa21.29■■□□□ 1
DDX55-205ENST00000538744 STRADAQ7RTN6 431 aa21.29■■□□□ 1
DDX55-205ENST00000538744 CROCCP2Q86T23 111 aa21.29■■□□□ 1
DDX55-205ENST00000538744 PCED1BQ96HM7 432 aa21.29■■□□□ 1
DDX55-205ENST00000538744 PCDH18Q9HCL0 1135 aa21.29■■□□□ 1
DDX55-205ENST00000538744 GPATCH2LQ9NWQ4 482 aa21.29■■□□□ 1
DDX55-205ENST00000538744 PHF24Q9UPV7 400 aa21.29■■□□□ 1
DDX55-205ENST00000538744 MYBPHLA2RUH7 354 aa21.29■■□□□ 1
DDX55-205ENST00000538744 KBTBD13C9JR72 458 aa21.29■■□□□ 1
DDX55-205ENST00000538744 ARVCFO00192 962 aa21.29■■□□□ 1
DDX55-205ENST00000538744 AP1G2O75843 785 aa21.29■■□□□ 1
DDX55-205ENST00000538744 EOMESO95936 686 aa21.29■■□□□ 1
DDX55-205ENST00000538744 ETS1P14921 441 aa21.29■■□□□ 1
DDX55-205ENST00000538744 PECAM1P16284 738 aaPredicted RBP21.29■■□□□ 1
DDX55-205ENST00000538744 MBTPS1Q14703 1052 aa21.29■■□□□ 1
DDX55-205ENST00000538744 ZNF296Q8WUU4 475 aaPredicted RBP21.29■■□□□ 1
DDX55-205ENST00000538744 FAM149B1Q96BN6 582 aa21.29■■□□□ 1
DDX55-205ENST00000538744 ZNF670Q9BS34 389 aa21.29■■□□□ 1
DDX55-205ENST00000538744 CDC42EP4Q9H3Q1 356 aaKnown RBP21.29■■□□□ 1
DDX55-205ENST00000538744 TPX2Q9ULW0 747 aaKnown RBP21.29■■□□□ 1
DDX55-205ENST00000538744 ARHGEF37A1IGU5 675 aa21.28■■□□□ 1
DDX55-205ENST00000538744 C9IYK1 514 aa21.28■■□□□ 1
DDX55-205ENST00000538744 I3L4J1 428 aa21.28■■□□□ 1
DDX55-205ENST00000538744 M0QZQ0 153 aa21.28■■□□□ 1
DDX55-205ENST00000538744 FBXO21O94952 628 aa21.28■■□□□ 1
DDX55-205ENST00000538744 IFNB1P01574 187 aa21.28■■□□□ 1
DDX55-205ENST00000538744 SHBGP04278 402 aa21.28■■□□□ 1
DDX55-205ENST00000538744 ZSCAN5DPP0CG00 497 aa21.28■■□□□ 1
DDX55-205ENST00000538744 BRCC3P46736 316 aa21.28■■□□□ 1
DDX55-205ENST00000538744 NOMO1Q15155 1222 aa21.28■■□□□ 1
DDX55-205ENST00000538744 PAN2Q504Q3 1202 aaKnown RBP21.28■■□□□ 1
DDX55-205ENST00000538744 DCLRE1AQ6PJP8 1040 aa21.28■■□□□ 1
DDX55-205ENST00000538744 GLB1LQ6UWU2 654 aa21.28■■□□□ 1
DDX55-205ENST00000538744 SLC24A5Q71RS6 500 aa21.28■■□□□ 1
DDX55-205ENST00000538744 DEFB106AQ8N104 65 aa21.28■■□□□ 1
DDX55-205ENST00000538744 RSAD2Q8WXG1 361 aa21.28■■□□□ 1
DDX55-205ENST00000538744 ADAM7Q9H2U9 754 aa21.28■■□□□ 1
DDX55-205ENST00000538744 NR1D1P20393 614 aa21.27■■□□□ 1
DDX55-205ENST00000538744 TKTL1P51854 596 aa21.27■■□□□ 1
DDX55-205ENST00000538744 YWHAZP63104 245 aaKnown RBP21.27■■□□□ 1
DDX55-205ENST00000538744 SKOR1P84550 965 aa21.27■■□□□ 1
DDX55-205ENST00000538744 CA9Q16790 459 aa21.27■■□□□ 1
DDX55-205ENST00000538744 SLC25A52Q3SY17 297 aa21.27■■□□□ 1
DDX55-205ENST00000538744 ANKRD20A8PQ5CZ79 823 aa21.27■■□□□ 1
DDX55-205ENST00000538744 CD300LGQ6UXG3 332 aa21.27■■□□□ 1
DDX55-205ENST00000538744 KDM7AQ6ZMT4 941 aa21.27■■□□□ 1
DDX55-205ENST00000538744 RTN4RL1Q86UN2 441 aaPredicted RBP21.27■■□□□ 1
DDX55-205ENST00000538744 ZCCHC9Q8N567 271 aaKnown RBP21.27■■□□□ 1
DDX55-205ENST00000538744 P3H4Q92791 437 aa21.27■■□□□ 1
DDX55-205ENST00000538744 SMARCD1Q96GM5 515 aa21.27■■□□□ 1
DDX55-205ENST00000538744 SMOQ99835 787 aa21.27■■□□□ 1
DDX55-205ENST00000538744 ACBD6Q9BR61 282 aa21.27■■□□□ 1
DDX55-205ENST00000538744 ADAM33Q9BZ11 813 aa21.27■■□□□ 1
DDX55-205ENST00000538744 RBP3P10745 1247 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 CAPN2P17655 700 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 TGM2P21980 687 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 IL4RP24394 825 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 NOS2P35228 1153 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 SULT1E1P49888 294 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 MORF4L2Q15014 288 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 DPYSL2Q16555 572 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 EMC10Q5UCC4 262 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 RSPH1Q8WYR4 309 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 FAF2Q96CS3 445 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 RTP3Q9BQQ7 232 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 TMEM109Q9BVC6 243 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 SEZ6LQ9BYH1 1024 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 BCCIPQ9P287 314 aaKnown RBP eCLIP21.26■□□□□ 0.99
DDX55-205ENST00000538744 AP4E1Q9UPM8 1137 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 APOL1O14791 398 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 RDXP35241 583 aaKnown RBP21.26■□□□□ 0.99
DDX55-205ENST00000538744 NDUFV1P49821 464 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 ROR1Q01973 937 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 DNAJC21Q5F1R6 531 aaKnown RBP21.26■□□□□ 0.99
DDX55-205ENST00000538744 INTS6LQ5JSJ4 861 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms