RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MMP3P08254 477 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 C6orf222P0C671 652 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PYGBP11216 843 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TAC1P20366 129 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SAT1P21673 171 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 NDUFV1P49821 464 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PITX1P78337 314 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 RNASELQ05823 741 aaKnown RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TFDP2Q14188 446 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ICE2Q659A1 982 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 FITM2Q8N6M3 262 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PPTC7Q8NI37 304 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 LPPQ93052 612 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 CENPTQ96BT3 561 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TTC25Q96NG3 672 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 BCO2Q9BYV7 579 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 UGT1A7Q9HAW7 530 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 UGT1A10Q9HAW8 530 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 UGT1A8Q9HAW9 530 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ZC3H7BQ9UGR2 993 aaKnown RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 HAO1Q9UJM8 370 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 INPP5FQ9Y2H2 1132 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PSME4Q14997 1843 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 H0Y3Z8 333 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 APOC4-APOC2K7ER74 178 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LPXNO60711 386 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 APOC2P02655 101 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 SMIM10L2AP0DMW4 78 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 SMIM10L2BP0DMW5 78 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ABCG1P45844 678 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 COPS2P61201 443 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LRRC38Q5VT99 294 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PRPF39Q86UA1 669 aaKnown RBP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 UNC5BQ8IZJ1 945 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PPP1R14CQ8TAE6 165 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 DEPDC1BQ8WUY9 529 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 TMEM40Q8WWA1 233 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 RNF34Q969K3 372 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LGMNQ99538 433 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ARL2BPQ9Y2Y0 163 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 CITO14578 2027 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 C3orf70A6NLC5 250 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ALOX15BO15296 676 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 HUS1O60921 280 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 USP12O75317 370 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 CBX6O95503 412 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 TOP3BO95985 862 aaKnown RBP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 CYP2F1P24903 491 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 GTF2A2P52657 109 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ADIGQ0VDE8 80 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 OLIG2Q13516 323 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 MOGSQ13724 837 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 KDELC2Q7Z4H8 507 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PIGWQ7Z7B1 504 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LRRC6Q86X45 466 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 MAML1Q92585 1016 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 MAML3Q96JK9 1138 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 APOL2Q9BQE5 337 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 MECRQ9BV79 373 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 TMEM109Q9BVC6 243 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LHX5Q9H2C1 402 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 LRRC4Q9HBW1 653 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ETNK2Q9NVF9 386 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 GRID1Q9ULK0 1009 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 SHOC2Q9UQ13 582 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 DRG1Q9Y295 367 aaKnown RBP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 C5orf60A6NFR6 353 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 GOT1P17174 413 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 GCAP28676 217 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 SULT1E1P49888 294 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 SOWAHAQ2M3V2 549 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PLEKHH3Q7Z736 793 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 HACE1Q8IYU2 909 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 CCDC185Q8N715 623 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PLD5Q8N7P1 536 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 PCDH19Q8TAB3 1148 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 NKD2Q969F2 451 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 RNF157Q96PX1 679 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBE3B-208ENST00000538070 ITGA11Q9UKX5 1188 aa9.06□□□□□ -0.96
UBE3B-208ENST00000538070 KCNK1O00180 336 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 FGFR1P11362 822 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 MAP3K7CLP57077 242 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 SLC6A3Q01959 620 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 FBXO47Q5MNV8 452 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 MARCH8Q5T0T0 291 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 NOTUMQ6P988 496 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 CNPY4Q8N129 248 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 APPL2Q8NEU8 664 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 EDEM1Q92611 657 aa9.05□□□□□ -0.96
UBE3B-208ENST00000538070 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms