RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 IKZF4Q9H2S9 585 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 F8VP50 259 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 PLK4O00444 970 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 GABRDO14764 452 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 CAPN9O14815 690 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 HOXC11O43248 304 aaPredicted RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 TBCAO75347 108 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 DKK1O94907 266 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 HLA-EP13747 358 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 LMO2P25791 158 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 ZNF131P52739 623 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 WNT7BP56706 349 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 ANAPC15P60006 121 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 SUZ12Q15022 739 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 SOWAHAQ2M3V2 549 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 GRAMD4Q6IC98 578 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 DHRS13Q6UX07 377 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 TMEM25Q86YD3 366 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 CCDC83Q8IWF9 413 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 BBS7Q8IWZ6 715 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 FAM184AQ8NB25 1140 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 DNASE2BQ8WZ79 361 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 OTUB2Q96DC9 234 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 TOE1Q96GM8 510 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 FCRL3Q96P31 734 aaPredicted RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 PRORYQ9H606 182 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 CD248Q9HCU0 757 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 CRTAC1Q9NQ79 661 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 DNAJC17Q9NVM6 304 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 GDAP2Q9NXN4 497 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
CLPB-208ENST00000538021 NAV2Q8IVL1 2488 aa11.87□□□□□ -0.51
CLPB-208ENST00000538021 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 WASH3PC4AMC7 463 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 J3QKU1 62 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 IRF1P10914 325 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 ADSSP30520 456 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 ABCD1P33897 745 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 NEK4P51957 841 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
CLPB-208ENST00000538021 RBP5P82980 135 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 BNC1Q01954 994 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 MAPRE1Q15691 268 aaKnown RBP11.86□□□□□ -0.51
CLPB-208ENST00000538021 SMAD1Q15797 465 aaKnown RBP11.86□□□□□ -0.51
CLPB-208ENST00000538021 TMEM119Q4V9L6 283 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 HS2ST1Q7LGA3 356 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
CLPB-208ENST00000538021 SAAL1Q96ER3 474 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 FIZ1Q96SL8 496 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 GABRG3Q99928 467 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 WSB2Q9NYS7 404 aaPredicted RBP11.86□□□□□ -0.51
CLPB-208ENST00000538021 ITGA11Q9UKX5 1188 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 BTBD3Q9Y2F9 522 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 PCDHGB2Q9Y5G2 931 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
CLPB-208ENST00000538021 A0A1B0GVT2 93 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 NEDD8-MDP1E9PL57 170 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 RRP8O43159 456 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 COCHO43405 550 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 TNFSF14O43557 240 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 EIF2S3P41091 472 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 SEMG2Q02383 582 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 POSTNQ15063 836 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 DBX2Q6ZNG2 339 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 BRSK2Q8IWQ3 736 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 LSM14AQ8ND56 463 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 KBTBD7Q8WVZ9 684 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 NXPE2Q96DL1 559 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 NACA2Q9H009 215 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 CHORDC1Q9UHD1 332 aaPredicted RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 EIF2B4Q9UI10 523 aaKnown RBP11.85□□□□□ -0.51
CLPB-208ENST00000538021 NFE2L3Q9Y4A8 694 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 CFAP46Q8IYW2 2715 aa11.85□□□□□ -0.51
CLPB-208ENST00000538021 E9PAM4 449 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 TMEM191BP0C7N4 346 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 TYRP14679 529 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 YWHAQP27348 245 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
CLPB-208ENST00000538021 CACNA2D1P54289 1103 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 CFHR1Q03591 330 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms