RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 HOXD1Q9GZZ0 328 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 GLT8D2Q9H1C3 349 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TP63Q9H3D4 680 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CXorf21Q9HAI6 301 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 GDAP2Q9NXN4 497 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TMEM9Q9P0T7 183 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ITGA11Q9UKX5 1188 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 COG5Q9UP83 839 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF652Q9Y2D9 606 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 A0A1W2PPW3 197 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TSPY2A6NKD2 308 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 MEI4A8MW99 385 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 B8ZZF3 427 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 PTCD1O75127 700 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 PROCP04070 461 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TSPY3P0CV98 308 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TSPY8P0CW00 308 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 KRT5P13647 590 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CTRB1P17538 263 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 NR4A1P22736 598 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CXCR2P25025 360 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 NMT1P30419 496 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TSPY1Q01534 308 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 NIPAL4Q0D2K0 466 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TRPC3Q13507 836 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CCNG2Q16589 344 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CTRB2Q6GPI1 263 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ANKRD26P1Q6NSI1 321 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 DPY19L2P1Q6NXN4 242 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 AGMOQ6ZNB7 445 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 OSTM1Q86WC4 334 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 RAVER1Q8IY67 606 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 BANPQ8N9N5 519 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TRIM63Q969Q1 353 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ALG13Q9NP73 1137 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CDC14AQ9UNH5 594 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 KIF13BQ9NQT8 1826 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ASTN2O75129 1339 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 SNTNA6NMZ2 147 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 NUAK1O60285 661 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 LPXNO60711 386 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 RRM1P23921 792 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 DCKP27707 260 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 SOX5P35711 763 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 TROAPQ12815 778 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 MESDQ14696 234 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 ZNF846Q147U1 533 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 CLEC16AQ2KHT3 1053 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 RALGPS1Q5JS13 557 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 CEP78Q5JTW2 689 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 TCHHL1Q5QJ38 904 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 LYSMD3Q7Z3D4 306 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 AKAP14Q86UN6 197 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 GALNT13Q8IUC8 556 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 SPARTQ8N0X7 666 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 DCLK2Q8N568 766 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 GLIS3Q8NEA6 775 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 PEX13Q92968 403 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 CMTM5Q96DZ9 223 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 ZNF347Q96SE7 839 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 RUBCNLQ9H714 662 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 PCDH12Q9NPG4 1184 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 SEPT11Q9NVA2 429 aaKnown RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 STMN3Q9NZ72 180 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 KCNN3Q9UGI6 736 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 TIAM2Q8IVF5 1701 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 ARHGEF35A5YM69 484 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 E9PMD0 336 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 DHRS4L1P0CG22 281 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 PRKCAP17252 672 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 POLR2CP19387 275 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 EIF2AK2P19525 551 aaKnown RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 BGNP21810 368 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 IL32P24001 234 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 IL4RP24394 825 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 MCAMP43121 646 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 PPP2R2BQ00005 443 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 CDKL1Q00532 357 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 PDIA2Q13087 525 aaKnown RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 MTMR2Q13614 643 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 FGD3Q5JSP0 725 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 SLC10A5Q5PT55 438 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 KIAA1841Q6NSI8 718 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 HAUS6Q7Z4H7 955 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 ARID3BQ8IVW6 561 aaPredicted RBP8.83□□□□□ -1
SRGAP1-202ENST00000537556 ELMOD2Q8IZ81 293 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 SIX6OS1Q8N1H7 587 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 KBTBD7Q8WVZ9 684 aa8.83□□□□□ -1
SRGAP1-202ENST00000537556 JDP2Q8WYK2 163 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms