RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 ADAT2Q7Z6V5 191 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 C1orf216Q8TAB5 229 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 SCFD1Q8WVM8 642 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 TSC1Q92574 1164 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 IGSF8Q969P0 613 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 GABRG3Q99928 467 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 MKRN2Q9H000 416 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 ITM2CQ9NQX7 267 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 DDX19AQ9NUU7 478 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 DDX43Q9NXZ2 648 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 CREBBPQ92793 2442 aa10.9□□□□□ -0.66
NEDD8-MDP1-202ENST00000534348 ZNF840PA6NDX5 716 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 E9PMD0 336 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MPOP05164 745 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 PAX3P23760 479 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 EVCP57679 992 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ZPBP2Q6X784 338 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 FBXL16Q8N461 479 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 PDCL2Q8N4E4 241 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 EID2Q8N6I1 236 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 KCNE4Q8WWG9 221 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TM9SF3Q9HD45 589 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 DPP3Q9NY33 737 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 USP36Q9P275 1121 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TBC1D14Q9P2M4 693 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 CLCA2Q9UQC9 943 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TMEM131Q92545 1883 aa10.89□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 AHCTF1Q8WYP5 2266 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 NEDD8-MDP1E9PL57 170 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 KRT38O76015 456 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ITGAVP06756 1048 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 IRF1P10914 325 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ACADMP11310 421 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 OXTRP30559 389 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SCN1AP35498 2009 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ACADVLP49748 655 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 LIG4P49917 911 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MAPK7Q13164 816 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 UBAP2LQ14157 1087 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 STARD3Q14849 445 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ATG14Q6ZNE5 492 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 BBS7Q8IWZ6 715 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TMEM161BQ8NDZ6 487 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 LEO1Q8WVC0 666 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TNFRSF25Q93038 417 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 BHMTQ93088 406 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SIPA1Q96FS4 1042 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 NUP58Q9BVL2 599 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 C6orf106Q9H6K1 298 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 BRMS1Q9HCU9 246 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ABCB6Q9NP58 842 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SPHK2Q9NRA0 654 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SH3BP1Q9Y3L3 701 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 PCDHB1Q9Y5F3 818 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 STON1Q9Y6Q2 735 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MYLKQ15746 1914 aa10.88□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 DOPEY1Q5JWR5 2465 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 LAD1O00515 517 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 HOXC11O43248 304 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TRAK2O60296 914 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ATP2C2O75185 946 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 C1SP09871 688 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ABCB4P21439 1286 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 BDNFP23560 247 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ACOT2P49753 483 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SMTNP53814 917 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MYL7Q01449 175 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SV2CQ496J9 727 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 HAUS3Q68CZ6 603 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 HIST2H2BCQ6DN03 193 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 TPGS1Q6ZTW0 290 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 DENND5BQ6ZUT9 1274 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 EXD3Q8N9H8 876 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 PRCCQ92733 491 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 WBP2Q969T9 261 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ACBD6Q9BR61 282 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 MSTO1Q9BUK6 570 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 A0A1B0GTQ1 180 aa10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 ENO4A6NNW6 628 aa10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 HNRNPDLO14979 420 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 OGTO15294 1046 aa10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 FAM189A1O60320 539 aa10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 SYNCRIPO60506 623 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 FSBPO95073 299 aa10.86□□□□□ -0.67
NEDD8-MDP1-202ENST00000534348 CDK4P11802 303 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms