RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PDGFRA	P16234	1089 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	KRT72	Q14CN4	511 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	SH3PXD2A	Q5TCZ1	1133 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	LCLAT1	Q6UWP7	414 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	PLD5	Q8N7P1	536 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRAPPC12	Q8WVT3	735 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	TEKT4	Q8WW24	435 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	NSL1	Q96IY1	281 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	MIPEP	Q99797	713 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	BTBD10	Q9BSF8	475 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	SUFU	Q9UMX1	484 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475		A0A0G2JND7	137 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	BCLAF3	A2AJT9	711 aa	Known RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	STAU1	O95793	577 aa	Known RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	IQCF3	P0C7M6	154 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	TAF11	Q15544	211 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	BOLA3	Q53S33	107 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	FGD4	Q96M96	766 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	TMEM120A	Q9BXJ8	343 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	RAB6B	Q9NRW1	208 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	MKS1	Q9NXB0	559 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	PRKCH	P24723	683 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	SERPINB4	P48594	390 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	CLCN3	P51790	818 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	C4orf50	Q6ZRC1	276 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAM183BP	Q6ZVS7	135 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	IFNLR1	Q8IU57	520 aa	Predicted RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	UBA3	Q8TBC4	463 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	LRRC39	Q96DD0	335 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	NAF1	Q96HR8	494 aa	Known RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	ZNF668	Q96K58	619 aa	Predicted RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	SPATA33	Q96N06	139 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	CADM1	Q9BY67	442 aa	Known RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	DCLRE1B	Q9H816	532 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	GBA2	Q9HCG7	927 aa	Predicted RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	ALG13	Q9NP73	1137 aa	Known RBP	24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	ARL8B	Q9NVJ2	186 aa		24.34	■■□□□ 1.49
GSDMD-208	ENST00000528475	SNRPA	P09012	282 aa	Known RBP	24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	BGN	P21810	368 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	IL4R	P24394	825 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	PHKA2	P46019	1235 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	KYAT1	Q16773	422 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	MAP1S	Q66K74	1059 aa	Predicted RBP	24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	SLC9A4	Q6AI14	798 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	OR6B2	Q6IFH4	312 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	C4orf22	Q6V702	233 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRIM42	Q8IWZ5	723 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	DHX37	Q8IY37	1157 aa	Known RBP	24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	TTC17	Q96AE7	1141 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	HPDL	Q96IR7	371 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	POPDC2	Q9HBU9	364 aa		24.33	■■□□□ 1.49
GSDMD-208	ENST00000528475	ZSWIM8	A7E2V4	1837 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZNF487	B1APH4	448 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	COPE	O14579	308 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	APOL1	O14791	398 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	KRT37	O76014	449 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	CYP3A5	P20815	502 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	CCNF	P41002	786 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	VGLL4	Q14135	290 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	KRT81	Q14533	505 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	STIL	Q15468	1287 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	AMHR2	Q16671	573 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	C15orf59	Q2T9L4	293 aa	Predicted RBP	24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	LGSN	Q5TDP6	509 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	CCDC62	Q6P9F0	684 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	C1orf228	Q6PIY5	440 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	PRPF39	Q86UA1	669 aa	Known RBP	24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	NLGN2	Q8NFZ4	835 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	KCNV2	Q8TDN2	545 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	TBCB	Q99426	244 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475	IFT122	Q9HBG6	1241 aa		24.33	■■□□□ 1.48
GSDMD-208	ENST00000528475		E5RJQ4	531 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	KCNN4	O15554	427 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	TMEM130	Q8N3G9	435 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	TEX9	Q8N6V9	391 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	PQLC3	Q8N755	202 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	MCU	Q8NE86	351 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	SRPK1	Q96SB4	655 aa	Known RBP	24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	KLC2	Q9H0B6	622 aa		24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	ASCC2	Q9H1I8	757 aa	Predicted RBP	24.32	■■□□□ 1.48
GSDMD-208	ENST00000528475	TRIM49D1	C9J1S8	452 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	AVIL	O75366	819 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	C22orf31	O95567	290 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	SLC25A27	O95847	323 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	OSBP	P22059	807 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	SERPINB3	P29508	390 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	GCK	P35557	465 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	NDST1	P52848	882 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	BLMH	Q13867	455 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	SLC10A6	Q3KNW5	377 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	CCDC14	Q49A88	953 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	RAB6C	Q53S08	254 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	CAND1	Q86VP6	1230 aa	Known RBP	24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	TTC8	Q8TAM2	541 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	AFG1L	Q8WV93	481 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	CFAP36	Q96G28	342 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	RAB6C	Q9H0N0	254 aa		24.31	■■□□□ 1.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms