RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
SRPRA-202ENST00000527817 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 FOXJ1Q92949 421 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 ZFRQ96KR1 1074 aaKnown RBP13.09□□□□□ -0.31
SRPRA-202ENST00000527817 HSPA12BQ96MM6 686 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 SPHK2Q9NRA0 654 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 CYP8B1Q9UNU6 501 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 GOLGA8IPA6NC78 632 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 GOLGA8JA6NMD2 632 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 NDUFS2O75306 463 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 TACC1O75410 805 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
SRPRA-202ENST00000527817 BMP15O95972 392 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 NDUFV2P19404 249 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 YWHAQP27348 245 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 WASP42768 502 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 GRIN1Q05586 938 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 SURF1Q15526 300 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 DUOXA2Q1HG44 320 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 METTL3Q86U44 580 aaKnown RBP13.08□□□□□ -0.32
SRPRA-202ENST00000527817 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 SYCP3Q8IZU3 236 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 NUP93Q8N1F7 819 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 PDZD8Q8NEN9 1154 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 OR5B17Q8NGF7 314 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 DNASE2BQ8WZ79 361 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 DNAJC19Q96DA6 116 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 BBC3Q96PG8 261 aaPredicted RBP13.08□□□□□ -0.32
SRPRA-202ENST00000527817 MMS19Q96T76 1030 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
SRPRA-202ENST00000527817 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
SRPRA-202ENST00000527817 ASH1LQ9NR48 2969 aaKnown RBP13.08□□□□□ -0.32
SRPRA-202ENST00000527817 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
SRPRA-202ENST00000527817 TRIM24O15164 1050 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 COCHO43405 550 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 GCNT3O95395 438 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 TNNC2P02585 160 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 ZNF883P0CG24 379 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
SRPRA-202ENST00000527817 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 ALCAMQ13740 583 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 ANO4Q32M45 955 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 HECTD3Q5T447 861 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 EGFLAMQ63HQ2 1017 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 DBX2Q6ZNG2 339 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 GPD1LQ8N335 351 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 GABRG3Q99928 467 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 SNX25Q9H3E2 840 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 TBC1D7Q9P0N9 293 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 RAXQ9Y2V3 346 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 PTPRBP23467 1997 aa13.07□□□□□ -0.32
SRPRA-202ENST00000527817 A0A1B0GTW7 788 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
SRPRA-202ENST00000527817 H3BQV1 296 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 GFRA2O00451 464 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 DKK1O94907 266 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 TUBP50607 506 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 GRIK2Q13002 908 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 CHPFQ8IZ52 775 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 LRIG1Q96JA1 1093 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 XPO6Q96QU8 1125 aaKnown RBP13.06□□□□□ -0.32
SRPRA-202ENST00000527817 ACOX2Q99424 681 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 KIF2CQ99661 725 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 MRPL45Q9BRJ2 306 aaKnown RBP13.06□□□□□ -0.32
SRPRA-202ENST00000527817 COMMD8Q9NX08 183 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 WDR35Q9P2L0 1181 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 STK17AQ9UEE5 414 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 NME7Q9Y5B8 376 aa13.06□□□□□ -0.32
SRPRA-202ENST00000527817 PRRT4C9JH25 899 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 CST3P01034 146 aaPredicted RBP13.05□□□□□ -0.32
SRPRA-202ENST00000527817 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 MAOBP27338 520 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 CD6P30203 668 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 CASP5P51878 434 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 CADM4Q8NFZ8 388 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms