RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TNFRSF8P28908 595 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 CDC25AP30304 524 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 CTBP1Q13363 440 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 KCNB1Q14721 858 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 ASIC2Q16515 512 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 PFKFB3Q16875 520 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 CERCAMQ5T4B2 595 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 LMBRD2Q68DH5 695 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 UBE2Q1Q7Z7E8 422 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 GAS2L3Q86XJ1 694 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 MPP5Q8N3R9 675 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 NR4A3Q92570 626 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 MTFMTQ96DP5 389 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 MVB12AQ96EY5 273 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 NLRP4Q96MN2 994 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 SCNM1Q9BWG6 230 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 PIH1D1Q9NWS0 290 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 USP35Q9P2H5 1018 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 STAP2Q9UGK3 403 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 MED16Q9Y2X0 877 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 WASHC2CQ9Y4E1 1318 aa3.41□□□□□ -1.86
ECHDC1-219ENST00000526299 SPRY2O43597 315 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 SYF2O95926 243 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 ALDH2P05091 517 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 CDKN1CP49918 316 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 BCAT1P54687 386 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 HSF1Q00613 529 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 SLC14A1Q13336 389 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 FGL2Q14314 439 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 MFSD13AQ14CX5 517 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 INPP5JQ15735 1006 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 FAM110CQ1W6H9 321 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 EARS2Q5JPH6 523 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 GSG1LQ6UXU4 331 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 TMPRSS12Q86WS5 348 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 LINC01465Q8N7H1 131 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 PLBD2Q8NHP8 589 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 DNAJB14Q8TBM8 379 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 WIPF2Q8TF74 440 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 DNASE2BQ8WZ79 361 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 ZBTB45Q96K62 511 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 MRGPRX1Q96LB2 322 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 CGRRF1Q99675 332 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 SMAD5Q99717 465 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM204Q9BSN7 226 aa3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 SEMA4BQ9NPR2 832 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-219ENST00000526299 A0A087WWL8 130 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 M0R3H8 397 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 BTN3A1O00481 513 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 RGS10O43665 173 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 CD63P08962 238 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 TACR3P29371 465 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 UQCRC1P31930 480 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 IL6STP40189 918 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 CFHR3Q02985 330 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 PRTGQ2VWP7 1150 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 GFI1BQ5VTD9 330 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 DCAF12L1Q5VU92 463 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 EGFLAMQ63HQ2 1017 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 ZNF324BQ6AW86 544 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 ZNF793Q6ZN11 406 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 B4GALNT4Q76KP1 1039 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 HSPBAP1Q96EW2 488 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 FAM84BQ96KN1 310 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 GAR1Q9NY12 217 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 STXBP5LQ9Y2K9 1186 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 SPEF1Q9Y4P9 236 aa3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 TTBK1Q5TCY1 1321 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM233B4DJY2 109 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 FYB1O15117 783 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TMPRSS11DO60235 418 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TBC1D4O60343 1298 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 AKAP5P24588 427 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 EPHA3P29320 983 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 MTHFSP49914 203 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TIRAPP58753 221 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 B4GALNT1Q00973 533 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 ZNF783Q6ZMS7 281 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 NR2C2APQ86WQ0 139 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 GRAMD1CQ8IYS0 662 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 PRPF38AQ8NAV1 312 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 MAP3K14Q99558 947 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 VN1R3Q9BXE9 311 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 USP29Q9HBJ7 922 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM8AQ9HCN3 771 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM45AQ9NWC5 275 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 ASAP1Q9ULH1 1129 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 COG5Q9UP83 839 aa3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 TRIP12Q14669 1992 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-219ENST00000526299 PRSS47A8MTI9 375 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 ALG1L2C9J202 215 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 EXOC5O00471 708 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 INPPL1O15357 1258 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 NDUFB8O95169 186 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 RASAL1O95294 804 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 IGKV3-20P01619 116 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 C9orf50Q5SZB4 431 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 CACHD1Q5VU97 1274 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms