RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 ITGA11Q9UKX5 1188 aa8.32□□□□□ -1.08
BDNF-213ENST00000525950 CASQ2O14958 399 aaPredicted RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 MED7O43513 233 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 GABRB2P47870 512 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 SOX10P56693 466 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 TFDP2Q14188 446 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 ARHGEF16Q5VV41 709 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 PRPF39Q86UA1 669 aaKnown RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 NUDCD3Q8IVD9 361 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 NME8Q8N427 588 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 ACMSDQ8TDX5 336 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 BTBD9Q96Q07 612 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 THTPAQ9BU02 230 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 CISHQ9NSE2 258 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 PGAP2Q9UHJ9 254 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 K7ERI5 159 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 FAM189A1O60320 539 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 TRUB2O95900 331 aaKnown RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 MYCLP12524 364 aaPredicted RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 UQCRBP14927 111 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 YWHAGP61981 247 aaKnown RBP eCLIP8.31□□□□□ -1.08
BDNF-213ENST00000525950 BASP1P80723 227 aaKnown RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 PRKCEQ02156 737 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 EMC2Q15006 297 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 C1orf146Q5VVC0 180 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 DHDDSQ86SQ9 333 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 ARID3BQ8IVW6 561 aaPredicted RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 ALDH16A1Q8IZ83 802 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 OR6Y1Q8NGX8 325 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 USP6NLQ92738 828 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 FAM84AQ96KN4 292 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 TUBGCP5Q96RT8 1024 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 POPDC2Q9HBU9 364 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 SAE1Q9UBE0 346 aaPredicted RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 ATP9BO43861 1147 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 L1CAMP32004 1257 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 MAGEA3P43357 314 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 YWHAZP63104 245 aaKnown RBP8.31□□□□□ -1.08
BDNF-213ENST00000525950 LAMB3Q13751 1172 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 HIC1Q14526 733 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 EFHC1Q5JVL4 640 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 FAM182BQ5T319 152 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 SWSAP1Q6NVH7 229 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 RFX6Q8HWS3 928 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 KIAA0319LQ8IZA0 1049 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 KCTD6Q8NC69 237 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 MTMR14Q8NCE2 650 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 SPATA18Q8TC71 538 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 ACAP3Q96P50 834 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 USP29Q9HBJ7 922 aa8.31□□□□□ -1.08
BDNF-213ENST00000525950 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 DCAF8L1A6NGE4 600 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 FAM159BA6NKW6 160 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 ZNF487B1APH4 448 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 TOMM70O94826 608 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 CST3P01034 146 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 ALOX15P16050 662 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 PRDX6P30041 224 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 AQP5P55064 265 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 DYNLT1P63172 113 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 TUBB3Q13509 450 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 CHI3L2Q15782 390 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 PTPN20Q4JDL3 420 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 RABGAP1LQ5R372 815 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 FBXO27Q8NI29 283 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 ACTRT2Q8TDY3 377 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 ACSF2Q96CM8 615 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 MCRS1Q96EZ8 462 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 SEPT9Q9UHD8 586 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 USP21Q9UK80 565 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 BCLAF3A2AJT9 711 aaKnown RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 C2orf71A6NGG8 1288 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 APOEP02649 317 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 NR3C2P08235 984 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 UBTFL6P0CB48 400 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 STX3Q13277 289 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 MED21Q13503 144 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 ZYXQ15942 572 aaKnown RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 TMEM126BQ8IUX1 230 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 WDR75Q8IWA0 830 aaKnown RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 DEPTORQ8TB45 409 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 TFAP2BQ92481 460 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 EZH1Q92800 747 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 ZBTB45Q96K62 511 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 EPAS1Q99814 870 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 NIFKQ9BYG3 293 aaKnown RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 GLIS2Q9BZE0 524 aaPredicted RBP8.3□□□□□ -1.08
BDNF-213ENST00000525950 KLHL4Q9C0H6 718 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 SDCBP2Q9H190 292 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 ZWILCHQ9H900 591 aa8.3□□□□□ -1.08
BDNF-213ENST00000525950 PLAC1Q9HBJ0 212 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms