RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 CDH9Q9ULB4 789 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 PECAM1P16284 738 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 GRK4P32298 578 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ADCY1Q08828 1119 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ZC3H12AQ5D1E8 599 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 VSIG1Q86XK7 387 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 RNF157Q96PX1 679 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 FOXP3Q9BZS1 431 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 LRRC4CQ9HCJ2 640 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 PCDH18Q9HCL0 1135 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 HMX1Q9NP08 348 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 GPATCH2LQ9NWQ4 482 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 BCCIPQ9P287 314 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 A0A1W2PQ45 241 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 A0A1W2PQY0 241 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 IFNB1P01574 187 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 ODC1P11926 461 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 EIF3EP60228 445 aaKnown RBP19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 TUSC3Q13454 348 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 ZNF598Q86UK7 904 aaKnown RBP19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 SLAIN1Q8ND83 568 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 LRRC4Q9HBW1 653 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 KRT82Q9NSB4 513 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 INPP5FQ9Y2H2 1132 aa19.28■□□□□ 0.68
TRAPPC9-210ENST00000521667 MYBPHLA2RUH7 354 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 NDC80O14777 642 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 MCF2LO15068 1137 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 SHOX2O60902 331 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 B3GAT3O94766 335 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 MYCP01106 439 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 IL4RP24394 825 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 PCSK1P29120 753 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 MATKP42679 507 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 MAP3K7CLP57077 242 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 MRPS5P82675 430 aaKnown RBP19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 ERMARDQ5T6L9 678 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 TRAF7Q6Q0C0 670 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 CEP128Q6ZU80 1094 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 CROCCP2Q86T23 111 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 FAM35AQ86V20 835 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 SIX6OS1Q8N1H7 587 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 ZCCHC9Q8N567 271 aaKnown RBP19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 SLC43A3Q8NBI5 491 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 SPATA18Q8TC71 538 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 RSAD2Q8WXG1 361 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 PCED1BQ96HM7 432 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 PWWP2AQ96N64 755 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 UROC1Q96N76 676 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 TMEM109Q9BVC6 243 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 CAPS2Q9BXY5 557 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 ADAM33Q9BZ11 813 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 ZMYND15Q9H091 742 aa19.27■□□□□ 0.68
TRAPPC9-210ENST00000521667 DAB1O75553 588 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 PAX3P23760 479 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 NOMO1Q15155 1222 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 CA9Q16790 459 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 STRADAQ7RTN6 431 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 DEFB106AQ8N104 65 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 UHMK1Q8TAS1 419 aaKnown RBP19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 MYCBPAPQ8TBZ2 947 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 P3H4Q92791 437 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 FAM149B1Q96BN6 582 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 ZNF670Q9BS34 389 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 STARD7Q9NQZ5 370 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 RGS18Q9NS28 235 aa19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 DNAJC17Q9NVM6 304 aaKnown RBP19.27■□□□□ 0.67
TRAPPC9-210ENST00000521667 ZNF487B1APH4 448 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 INPPL1O15357 1258 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 AP1G2O75843 785 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 TTC4O95801 387 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 RBP3P10745 1247 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 ATP1A2P50993 1020 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 GDF10P55107 478 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 YWHAZP63104 245 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 MORF4L2Q15014 288 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 ARHGEF6Q15052 776 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 PAN2Q504Q3 1202 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 ANKRD20A8PQ5CZ79 823 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 METTL23Q86XA0 190 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 RELL1Q8IUW5 271 aa19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 NDRG1Q92597 394 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 NOVA2Q9UNW9 492 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-210ENST00000521667 I3L4J1 428 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 CYP11A1P05108 521 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 TKTL1P51854 596 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 CDR1P51861 262 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 ATXN1P54253 815 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 DPYSL2Q16555 572 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 SLC25A52Q3SY17 297 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 RNASEH2BQ5TBB1 312 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 CD300LGQ6UXG3 332 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 NPNTQ6UXI9 565 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 ARFGAP2Q8N6H7 521 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 FAF2Q96CS3 445 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 PGM2Q96G03 612 aa19.25■□□□□ 0.67
TRAPPC9-210ENST00000521667 SMOQ99835 787 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms