RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SYTL1Q8IYJ3 562 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 SPICE1Q8N0Z3 855 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 MBD3L2Q8NHZ7 208 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 XAGE5Q8WWM1 108 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 KIAA1191Q96A73 305 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 HIST1H2AAQ96QV6 131 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 RPS6KC1Q96S38 1066 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 HAPLN3Q96S86 360 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 TIMP4Q99727 224 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 DPCDQ9BVM2 203 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC25A32Q9H2D1 315 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 ALG13Q9NP73 1137 aaKnown RBP3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 NECTIN3Q9NQS3 549 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 GJB4Q9NTQ9 266 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 RGL1Q9NZL6 768 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 LRCH1Q9Y2L9 728 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 ENTPD2Q9Y5L3 495 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 ABHD14A-ACY1A0A1B0GW23 586 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 QSOX1O00391 747 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CCNT2O60583 730 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 HGFP14210 728 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 WT1P19544 449 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 RBL1P28749 1068 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 PCSK6P29122 969 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 SERPINB3P29508 390 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 ATICP31939 592 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CYP2C18P33260 490 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 PPM1AP35813 382 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 TECP42680 631 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CCT8P50990 548 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 EEFSECP57772 596 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 KCNAB1Q14722 419 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 MAPKAPK3Q16644 382 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC5A9Q2M3M2 681 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 AARS2Q5JTZ9 985 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 ARL6IP4Q66PJ3 421 aaKnown RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 FBXO38Q6PIJ6 1188 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CRTC1Q6UUV9 634 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 KIAA0408Q6ZU52 694 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 Q6ZWC4 215 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZNF804AQ7Z570 1209 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 LRRC71Q8N4P6 559 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 SIMC1Q8NDZ2 872 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 ABHD11Q8NFV4 315 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 ABHD5Q8WTS1 349 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 TBC1D5Q92609 795 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMEM41AQ96HV5 264 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 UROC1Q96N76 676 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 STK33Q9BYT3 514 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 PLCB1Q9NQ66 1216 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 DLL3Q9NYJ7 618 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 NKX1-2Q9UD57 310 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 VPS51Q9UID3 782 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CCNL1Q9UK58 526 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 TLK1Q9UKI8 766 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 CA14Q9ULX7 337 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 INSL6Q9Y581 213 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 PCDHGB2Q9Y5G2 931 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 COL15A1P39059 1388 aa3.89□□□□□ -1.79
HMGB1P41-201ENST00000520234 KIAA0355O15063 1070 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 NDST3O95803 873 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 NPSP0C0P6 89 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 EBLN1P0CF75 366 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 MYCLP12524 364 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 JUPP14923 745 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 EGR1P18146 543 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 ABCB4P21439 1286 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 CTGFP29279 349 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 GKP32189 559 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 PLA2G5P39877 138 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 GRM1Q13255 1194 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 ST3GAL2Q16842 350 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMEM63BQ5T3F8 832 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 DENND2CQ68D51 928 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 CCDC28AQ8IWP9 274 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 SIRT6Q8N6T7 355 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 GLIS1Q8NBF1 620 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 NGDNQ8NEJ9 315 aaKnown RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 GPR150Q8NGU9 434 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZBTB45Q96K62 511 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 TTLL2Q9BWV7 592 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 FSD1LQ9BXM9 530 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 WDR12Q9GZL7 423 aaKnown RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 SYNPO2LQ9H987 977 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 DUSP22Q9NRW4 184 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 ADARB2Q9NS39 739 aaKnown RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 PTGFRNQ9P2B2 879 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 STEAP1Q9UHE8 339 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC39A10Q9ULF5 831 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZMYND8Q9ULU4 1186 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 DAAM1Q9Y4D1 1078 aa3.88□□□□□ -1.79
HMGB1P41-201ENST00000520234 FAM234BA2RU67 622 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 OR2W5A6NFC9 320 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 A8MVJ9 347 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 EXOC5O00471 708 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms