RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RBL1P28749 1068 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 SLC5A2P31639 672 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 GKP32189 559 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 PTH2RP49190 550 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 TSTD2Q5T7W7 516 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 FAXCQ5TGI0 409 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 RASAL3Q86YV0 1011 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 FAM98AQ8NCA5 519 aaKnown RBP7.25□□□□□ -1.25
PTPN12-213ENST00000519553 LENG8Q96PV6 779 aaPredicted RBP7.25□□□□□ -1.25
PTPN12-213ENST00000519553 TTLL2Q9BWV7 592 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 WDR12Q9GZL7 423 aaKnown RBP7.25□□□□□ -1.25
PTPN12-213ENST00000519553 PLCB1Q9NQ66 1216 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 ZMYND8Q9ULU4 1186 aaPredicted RBP7.25□□□□□ -1.25
PTPN12-213ENST00000519553 SLC27A6Q9Y2P4 619 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 CEP83Q9Y592 693 aa7.25□□□□□ -1.25
PTPN12-213ENST00000519553 SPRY2O43597 315 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 C1QL1O75973 258 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 PECAM1P16284 738 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 WT1P19544 449 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 EEFSECP57772 596 aaKnown RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 GPS1Q13098 491 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 CLCA4Q14CN2 919 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 RAB30Q15771 203 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 AARS2Q5JTZ9 985 aaKnown RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 KRT73Q86Y46 540 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 C11orf44Q8N8P7 122 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 PMM1Q92871 262 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 TMEM41AQ96HV5 264 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 THAP7Q9BT49 309 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 DPCDQ9BVM2 203 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN12-213ENST00000519553 NECTIN3Q9NQS3 549 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 TM7SF3Q9NS93 570 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 ASB6Q9NWX5 421 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 SLC39A10Q9ULF5 831 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 ADAMTS5Q9UNA0 930 aa7.24□□□□□ -1.25
PTPN12-213ENST00000519553 OR2W5A6NFC9 320 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 M0R3H8 397 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 AP4M1O00189 453 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 HNRNPDLO14979 420 aaKnown RBP7.23□□□□□ -1.25
PTPN12-213ENST00000519553 ADAMTS3O15072 1205 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 CBFA2T3O75081 653 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 COQ9O75208 318 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 BIRC2Q13490 618 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 MAPKAPK3Q16644 382 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 TMTC4Q5T4D3 741 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 FBXO38Q6PIJ6 1188 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 CLEC9AQ6UXN8 241 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 TBC1D5Q92609 795 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 SARAFQ96BY9 339 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 WDR24Q96S15 920 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 CRB3Q9BUF7 120 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 ZCWPW1Q9H0M4 648 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 TMEM8AQ9HCN3 771 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 SEMA4GQ9NTN9 838 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 INSL6Q9Y581 213 aa7.23□□□□□ -1.25
PTPN12-213ENST00000519553 POLR2AP24928 1970 aaKnown RBP7.22□□□□□ -1.25
PTPN12-213ENST00000519553 A0A087WV62 115 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 PSMD9O00233 223 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 SNX2O60749 519 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 DLDP09622 509 aaKnown RBP7.22□□□□□ -1.25
PTPN12-213ENST00000519553 NPSP0C0P6 89 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 IDEP14735 1019 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 MCM5P33992 734 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 TECP42680 631 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 PSG6Q00889 435 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 RAB11FIP4Q86YS3 637 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 SYTL1Q8IYJ3 562 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 SUN3Q8TAQ9 357 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
PTPN12-213ENST00000519553 CPNE5Q9HCH3 593 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 STEAP1Q9UHE8 339 aa7.22□□□□□ -1.25
PTPN12-213ENST00000519553 CCNL1Q9UK58 526 aaPredicted RBP7.22□□□□□ -1.25
PTPN12-213ENST00000519553 QSOX1O00391 747 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 FAM163BP0C2L3 166 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 FPR3P25089 353 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
PTPN12-213ENST00000519553 CYP4F2P78329 520 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 MTAPQ13126 283 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 STARD3Q14849 445 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 ARHGAP15Q53QZ3 475 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 RNASE12Q5GAN4 147 aaKnown RBP7.21□□□□□ -1.26
PTPN12-213ENST00000519553 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 AMIGO2Q86SJ2 522 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 ABHD11Q8NFV4 315 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 REPS1Q96D71 796 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 MACROD1Q9BQ69 325 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 R3HDMLQ9H3Y0 253 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 TMOD4Q9NZQ9 345 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 IGSF9Q9P2J2 1179 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 ARPP21Q9UBL0 812 aaPredicted RBP7.21□□□□□ -1.26
PTPN12-213ENST00000519553 LPAR3Q9UBY5 353 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 ZNHIT2Q9UHR6 403 aa7.21□□□□□ -1.26
PTPN12-213ENST00000519553 A8MVJ9 347 aa7.2□□□□□ -1.26
PTPN12-213ENST00000519553 PDE8BO95263 885 aa7.2□□□□□ -1.26
PTPN12-213ENST00000519553 BMP5P22003 454 aa7.2□□□□□ -1.26
PTPN12-213ENST00000519553 SOX10P56693 466 aa7.2□□□□□ -1.26
PTPN12-213ENST00000519553 TNFAIP2Q03169 654 aa7.2□□□□□ -1.26
PTPN12-213ENST00000519553 NSUN2Q08J23 767 aaKnown RBP eCLIP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms