RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CES5AQ6NT32 575 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 BTNL9Q6UXG8 535 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 Q6YL49 198 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 MAMDC2Q7Z304 686 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ERC1Q8IUD2 1116 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ZC3H7AQ8IWR0 971 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 DHX37Q8IY37 1157 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 FANCMQ8IYD8 2048 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 CMTR2Q8IYT2 770 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 BEND2Q8NDZ0 799 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 MDGA1Q8NFP4 955 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 CYP2W1Q8TAV3 490 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 AFG1LQ8WV93 481 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 POF1BQ8WVV4 589 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 GFM2Q969S9 779 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 IWS1Q96ST2 819 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 GPHA2Q96T91 129 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ARMT1Q9H993 441 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 CCPG1Q9ULG6 757 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 SQORQ9Y6N5 450 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 MYH7BA7E2Y1 1941 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 CYP2D7A0A087X1C5 515 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 PTPDC1A2A3K4 754 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 C17orf102A2RUQ5 167 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 PDPK1O15530 556 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 MFAP3LO75121 409 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 EIF3JO75822 258 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 IPO13O94829 963 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 MBD4O95243 580 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 AMY2AP04746 511 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RPLP2P05387 115 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 STAG3L1P0CL83 205 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 TGFB3P10600 412 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 AMY2BP19961 511 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 MCCP23508 829 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 DNAJB1P25685 340 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 ADD2P35612 726 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 MTHFRP42898 656 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RPS6P62753 249 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 IFRD2Q12894 506 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 IKQ13123 557 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 STXBP2Q15833 593 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 DUSP6Q16828 381 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 ZNF528Q3MIS6 628 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 HSP90AB4PQ58FF6 505 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 ANKRD54Q6NXT1 300 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 LRSAM1Q6UWE0 723 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RASGRP2Q7LDG7 609 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RBM23Q86U06 439 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 CELF2-AS1Q8N7Q2 184 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 C9orf106Q8NAJ2 232 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 PPTC7Q8NI37 304 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 NSUN6Q8TEA1 469 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 ATP6V0A1Q93050 837 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 SECISBP2LQ93073 1101 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 CEP95Q96GE4 821 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 MRFAP1L1Q96HT8 127 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 TCF25Q9BQ70 676 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 FTHL17Q9BXU8 183 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RANBP17Q9H2T7 1088 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 RNPEPQ9H4A4 650 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 CYP4F11Q9HBI6 524 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 WNT16Q9UBV4 365 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 BARX2Q9UMQ3 279 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 LZTS1Q9Y250 596 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 SLC4A4Q9Y6R1 1079 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 LCTP09848 1927 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 KIAA1217Q5T5P2 1943 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 CFAP47Q6ZTR5 3102 aa4.24□□□□□ -1.73
PDLIM5-218ENST00000513341 SETXQ7Z333 2677 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 SPTBN2O15020 2390 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 GOLIM4O00461 696 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TRIM24O15164 1050 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ZNF185O15231 689 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 PI15O43692 258 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ARIH2O95376 493 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TSPY3P0CV98 308 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TSPY8P0CW00 308 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 GNAT2P19087 354 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 CALML3P27482 149 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ELLP55199 621 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 PAK1Q13153 545 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TDGQ13569 410 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 LY6KQ17RY6 165 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TIGD2Q4W5G0 525 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 PRR16Q569H4 304 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ATAT1Q5SQI0 421 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 FKBP15Q5T1M5 1219 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 FBXO42Q6P3S6 717 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 CHST3Q7LGC8 479 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ADGRD2Q7Z7M1 963 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 TRMT2AQ8IZ69 625 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 SUMF1Q8NBK3 374 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 FAM98AQ8NCA5 519 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 CASP10Q92851 521 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 OSBP2Q969R2 916 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms