RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 ANKRD36BP1Q96IX9 119 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 CRTAC1Q9NQ79 661 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 DNAJC17Q9NVM6 304 aaKnown RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 SETXQ7Z333 2677 aaKnown RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 IGSF10Q6WRI0 2623 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 FLRT2O43155 660 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 CILPO75339 1184 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 ATXN1LP0C7T5 689 aaKnown RBP13.36□□□□□ -0.27
DDX41-215ENST00000512431 YWHAQP27348 245 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 ADSSP30520 456 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 EGFLAMQ63HQ2 1017 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 TMEM25Q86YD3 366 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 MIB1Q86YT6 1006 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 ZCCHC9Q8N567 271 aaKnown RBP13.36□□□□□ -0.27
DDX41-215ENST00000512431 ENGASEQ8NFI3 743 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 CADM4Q8NFZ8 388 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 RAD54LQ92698 747 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 MRGPRX1Q96LB2 322 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 GABRG3Q99928 467 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 NACA2Q9H009 215 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 PCDHGB2Q9Y5G2 931 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 CEP192Q8TEP8 1941 aa13.36□□□□□ -0.27
DDX41-215ENST00000512431 PLXNB3Q9ULL4 1909 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 E9PAM4 449 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 GFRA2O00451 464 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 BCAT2O15382 392 aaPredicted RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 COCHO43405 550 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 TNNC2P02585 160 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 PRB1P04280 392 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 NCAM1P13591 858 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 WNT7BP56706 349 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 STARD3Q14849 445 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 HLA-BQ31612 363 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 LRRC69Q6ZNQ3 347 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 BBS7Q8IWZ6 715 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 SYCP3Q8IZU3 236 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 TOE1Q96GM8 510 aaKnown RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 ACOX2Q99424 681 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 GPR174Q9BXC1 333 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 ELOVL4Q9GZR5 314 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 SLC6A17Q9H1V8 727 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 IKZF4Q9H2S9 585 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 MRPL44Q9H9J2 332 aaKnown RBP13.35□□□□□ -0.27
DDX41-215ENST00000512431 IL21RQ9HBE5 538 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 WDR35Q9P2L0 1181 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
DDX41-215ENST00000512431 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 CAPN9O14815 690 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 TRIM24O15164 1050 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 HLA-EP13747 358 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 GARTP22102 1010 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 OXTRP30559 389 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 DCAF12L1Q5VU92 463 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 METTL3Q86U44 580 aaKnown RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 SFR1Q86XK3 245 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 LSM14AQ8ND56 463 aaKnown RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 CRELD1Q96HD1 420 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 TOR4AQ9NXH8 423 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 WSB2Q9NYS7 404 aaPredicted RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 HCN2Q9UL51 889 aa13.34□□□□□ -0.27
DDX41-215ENST00000512431 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
DDX41-215ENST00000512431 GOLGA8IPA6NC78 632 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 GOLGA8JA6NMD2 632 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 TNFSF14O43557 240 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms