RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OTUB2Q96DC9 234 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 DNAI2Q9GZS0 605 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
TPM3-219ENST00000509409 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
TPM3-219ENST00000509409 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
TPM3-219ENST00000509409 MMP17Q9ULZ9 603 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 OBSL1O75147 1896 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 MAPK13O15264 365 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 KLF8O95600 359 aaPredicted RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 PSMC2P35998 433 aaKnown RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 MPLP40238 635 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 EIF2DP41214 584 aaKnown RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 GRIA2P42262 883 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 TNFRSF4P43489 277 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 ASPAP45381 313 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 TUBP50607 506 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 CREB5Q02930 508 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 DPYDQ12882 1025 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 ANO4Q32M45 955 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 EMC10Q5UCC4 262 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 ALLCQ8N6M5 410 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 TXNDC5Q8NBS9 432 aaKnown RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
TPM3-219ENST00000509409 CYFIP2Q96F07 1278 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 CCDC34Q96HJ3 373 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 VPS45Q9NRW7 570 aa16.27■□□□□ 0.2
TPM3-219ENST00000509409 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 TLR5O60602 858 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 ZNF202O95125 648 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 CAVIN2O95810 425 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 TBX18O95935 607 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 ZDHHC11BP0C7U3 371 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 CD58P19256 250 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 CRY1Q16526 586 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 NFIL3Q16649 462 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 C11orf74Q86VG3 221 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 SFTPA1Q8IWL2 248 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 PGBD3Q8N328 593 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
TPM3-219ENST00000509409 TAS1R2Q8TE23 839 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 ZFRQ96KR1 1074 aaKnown RBP16.26■□□□□ 0.19
TPM3-219ENST00000509409 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
TPM3-219ENST00000509409 BCCIPQ9P287 314 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM3-219ENST00000509409 DEC1Q9P2X7 70 aa16.26■□□□□ 0.19
TPM3-219ENST00000509409 ANAPC1Q9H1A4 1944 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 A0A1W2PQ27 194 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 A0A1W2PQ64 194 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 A0A1W2PQD8 194 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 FAM92AA1XBS5 289 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 ACO1P21399 889 aaKnown RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 PGFP49763 221 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 PPP3CAQ08209 521 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 GOLGA8FQ08AF8 430 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 GOLGA8DPQ0D2H9 430 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 HSF5Q4G112 596 aaPredicted RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 EOGTQ5NDL2 527 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 PLA2G2CQ5R387 149 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 STPG1Q5TH74 334 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 TMEM92Q6UXU6 159 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 TMEM25Q86YD3 366 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 IL17RCQ8NAC3 791 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 WBP2Q969T9 261 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 HNRNPABQ99729 332 aaKnown RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 APOBEC3GQ9HC16 384 aaKnown RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 ZDHHC4Q9NPG8 344 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 SPHK2Q9NRA0 654 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 RXFP3Q9NSD7 469 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
TPM3-219ENST00000509409 GREB1Q4ZG55 1949 aa16.25■□□□□ 0.19
TPM3-219ENST00000509409 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 SGK1O00141 431 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 MAP3K13O43283 966 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 LIMK1P53667 647 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 CLEC20AQ6ZU45 233 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 RASSF3Q86WH2 238 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 MDGA1Q8NFP4 955 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
TPM3-219ENST00000509409 HEXIM2Q96MH2 286 aaKnown RBP16.24■□□□□ 0.19
TPM3-219ENST00000509409 KLF16Q9BXK1 252 aaPredicted RBP16.24■□□□□ 0.19
TPM3-219ENST00000509409 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 TMEM8AQ9HCN3 771 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms