RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ATRIPQ8WXE1 791 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 SHC3Q92529 594 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 FBXO32Q969P5 355 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 JAKMIP2Q96AA8 810 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 CLDN23Q96B33 292 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 ERGIC2Q96RQ1 377 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 SLC22A12Q96S37 553 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 NT5C1AQ9BXI3 368 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 UBE2TQ9NPD8 197 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 DMAP1Q9NPF5 467 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 DUS2Q9NX74 493 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 CYTH4Q9UIA0 394 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 DNAJC12Q9UKB3 198 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 R4GN57 208 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 ZFHX2Q9C0A1 2572 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM170AA1A519 330 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF840PA6NDX5 716 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 O00370 1275 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TNFRSF10BO14763 440 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM200BP0CF97 657 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 MBL2P11226 248 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 ARSAP15289 507 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 UCHL3P15374 230 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 BRD2P25440 801 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 CTHP32929 405 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 MAP3K7CLP57077 242 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 GRSF1Q12849 480 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 NR1H3Q13133 447 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 DGKKQ5KSL6 1271 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TSSK4Q6SA08 328 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TMEM270Q6UE05 265 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 CLEC20AQ6ZU45 233 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 BHLHA9Q7RTU4 235 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 CPA6Q8N4T0 437 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 PDZD8Q8NEN9 1154 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 RIN3Q8TB24 985 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 BAP1Q92560 729 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 CYFIP2Q96F07 1278 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TMEM176AQ96HP8 235 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FAXDC2Q96IV6 333 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM83CQ9BQN1 747 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TTLL2Q9BWV7 592 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 NAT10Q9H0A0 1025 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM207AQ9NSI2 230 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 RBM12Q9NTZ6 932 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 SMPD4Q9NXE4 827 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 IFNKQ9P0W0 207 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 TJP2Q9UDY2 1190 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 CHORDC1Q9UHD1 332 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 FBXO4Q9UKT5 387 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 WNT6Q9Y6F9 365 aa9.23□□□□□ -0.93
PDLIM5-213ENST00000509357 SMTNL1A8MU46 457 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 F8VZ95 297 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 LEFTY2O00292 366 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 PES1O00541 588 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CYP26A1O43174 497 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 PFKLP17858 780 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CXCL12P48061 93 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CCR3P51677 355 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 SLC5A3P53794 718 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 SLC8A3P57103 927 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 UBXN1Q04323 297 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CETN1Q12798 172 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 DRAP1Q14919 205 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF528Q3MIS6 628 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 HECTD3Q5T447 861 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 ARHGAP17Q68EM7 881 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 TXNDC11Q6PKC3 985 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 SLC47A2Q86VL8 602 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM71AQ8IYT1 594 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 TTC39CQ8N584 583 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 WDTC1Q8N5D0 677 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 SCAMP5Q8TAC9 235 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 OSCP1Q8WVF1 389 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 OVCA2Q8WZ82 227 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 DDX1Q92499 740 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 HNRNPABQ99729 332 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 IER2Q9BTL4 223 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 XPO4Q9C0E2 1151 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CHRDQ9H2X0 955 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 SEMA4AQ9H3S1 761 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 FBXO44Q9H4M3 255 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CSNK1G1Q9HCP0 422 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 ARHGAP26Q9UNA1 814 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 PCDHB4Q9Y5E5 795 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 CPQQ9Y646 472 aa9.22□□□□□ -0.93
PDLIM5-213ENST00000509357 F5P12259 2224 aa9.21□□□□□ -0.93
PDLIM5-213ENST00000509357 PRR23AA6NEV1 266 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SHISA7A6NL88 538 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms