RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SLC30A4O14863 429 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 DCLK1O15075 740 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 FOXD2O60548 495 aaPredicted RBP13.22□□□□□ -0.29
PDPN-208ENST00000509009 EPN2O95208 641 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 TBX18O95935 607 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 ADH1CP00326 375 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 ADORA2BP29275 332 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 EIF2DP41214 584 aaKnown RBP13.22□□□□□ -0.29
PDPN-208ENST00000509009 MRPS21P82921 87 aaKnown RBP13.22□□□□□ -0.29
PDPN-208ENST00000509009 EMC10Q5UCC4 262 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 OTUB2Q96DC9 234 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
PDPN-208ENST00000509009 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 DUSP15Q9H1R2 295 aaPredicted RBP13.22□□□□□ -0.29
PDPN-208ENST00000509009 MMP17Q9ULZ9 603 aa13.22□□□□□ -0.29
PDPN-208ENST00000509009 MYOFQ9NZM1 2061 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 TLR5O60602 858 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 CILPO75339 1184 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 KAT7O95251 611 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 APODP05090 189 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 FAM200BP0CF97 657 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 ADH5P11766 374 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 GTF2H1P32780 548 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 GRIA2P42262 883 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 DGKEP52429 567 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 GAD2Q05329 585 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SF3A2Q15428 464 aaKnown RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 CCDC6Q16204 474 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 EDRF1Q3B7T1 1238 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 BBS7Q8IWZ6 715 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SMYD4Q8IYR2 804 aaPredicted RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 FMR1NBQ8N0W7 255 aaPredicted RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 TSTD1Q8NFU3 115 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SEMA4DQ92854 862 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 EEF2KMTQ96G04 330 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 KLF16Q9BXK1 252 aaPredicted RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 TLR8Q9NR97 1041 aaKnown RBP13.21□□□□□ -0.29
PDPN-208ENST00000509009 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SCML2Q9UQR0 700 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 INVSQ9Y283 1065 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SH3BP1Q9Y3L3 701 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 SPAG17Q6Q759 2223 aa13.21□□□□□ -0.29
PDPN-208ENST00000509009 RALGAPA1Q6GYQ0 2036 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 GREM1O60565 184 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDPN-208ENST00000509009 CD58P19256 250 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
PDPN-208ENST00000509009 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
PDPN-208ENST00000509009 PNOCQ13519 176 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 CRY1Q16526 586 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 USP39Q53GS9 565 aaKnown RBP13.2□□□□□ -0.3
PDPN-208ENST00000509009 KRT39Q6A163 491 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 PHTF2Q8N3S3 785 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 NAT16Q8N8M0 369 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 IL17RCQ8NAC3 791 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 DUSP16Q9BY84 665 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 NACA2Q9H009 215 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 CYLDQ9NQC7 956 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 SPHK2Q9NRA0 654 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 PCDHGA5Q9Y5G8 931 aa13.2□□□□□ -0.3
PDPN-208ENST00000509009 ABCA7Q8IZY2 2146 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 SGK1O00141 431 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 TM4SF5O14894 197 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 CETN3O15182 167 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 HOXC11O43248 304 aaPredicted RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 KLF8O95600 359 aaPredicted RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 IRF1P10914 325 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 TIE1P35590 1138 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 PRCPP42785 496 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 KIF11P52732 1056 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 HSF5Q4G112 596 aaPredicted RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 SCD5Q86SK9 330 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 TXNDC5Q8NBS9 432 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 ENGASEQ8NFI3 743 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms