RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 C10orf76Q5T2E6 689 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 SLFN12LQ6IEE8 588 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 SDE2Q6IQ49 451 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 FAM171BQ6P995 826 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 IL27RAQ6UWB1 636 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 VSTM1Q6UX27 236 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 C4orf50Q6ZRC1 276 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 DENND5BQ6ZUT9 1274 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 ZNF843Q8N446 348 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
CDK11A-220ENST00000492390 IPO4Q8TEX9 1081 aaKnown RBP16.65■□□□□ 0.26
CDK11A-220ENST00000492390 TTLL2Q9BWV7 592 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 SMPD4Q9NXE4 827 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 TENM4Q6N022 2769 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 MYOFQ9NZM1 2061 aa16.65■□□□□ 0.26
CDK11A-220ENST00000492390 CFAP46Q8IYW2 2715 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 K7ENM7 598 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 GABRDO14764 452 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 HOXC11O43248 304 aaPredicted RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 CILPO75339 1184 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 TULP3O75386 442 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 PLA2G4BP0C869 781 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 PRPHP41219 470 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 MATKP42679 507 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 WASP42768 502 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 TERB1Q8NA31 727 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 RHBDD1Q8TEB9 315 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 PRDM16Q9HAZ2 1276 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 IL21RQ9HBE5 538 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 GDAP2Q9NXN4 497 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 MAGEC2Q9UBF1 373 aaPredicted RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 AGO2Q9UKV8 859 aaKnown RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
CDK11A-220ENST00000492390 SRPRBQ9Y5M8 271 aaKnown RBP16.64■□□□□ 0.25
CDK11A-220ENST00000492390 E2F8A0AVK6 867 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 CAPN8A6NHC0 703 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 J3QKU1 62 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 CAPN9O14815 690 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 IL18RAPO95256 599 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
CDK11A-220ENST00000492390 USP46P62068 366 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 SMAD1Q15797 465 aaKnown RBP16.63■□□□□ 0.25
CDK11A-220ENST00000492390 IL17AQ16552 155 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 ARSHQ5FYA8 562 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
CDK11A-220ENST00000492390 DTHD1Q6ZMT9 781 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 OSTM1Q86WC4 334 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 MIB1Q86YT6 1006 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 CHPFQ8IZ52 775 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 NAT16Q8N8M0 369 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
CDK11A-220ENST00000492390 MEI4A8MW99 385 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 ANKRD63C9JTQ0 380 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 HLA-EP13747 358 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 ANXA13P27216 316 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 ITPKBP27987 946 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 CD6P30203 668 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 POLR2BP30876 1174 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 GRIK1P39086 918 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 NOP14P78316 857 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 GTF2BQ00403 316 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 SUZ12Q15022 739 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 LRRC69Q6ZNQ3 347 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 ZCCHC9Q8N567 271 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 MYCT1Q8N699 235 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 TOP6BLQ8N6T0 577 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 LRRC52Q8N7C0 313 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 CADM4Q8NFZ8 388 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 MRGPRX1Q96LB2 322 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 GABRG3Q99928 467 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 GOLPH3LQ9H4A5 285 aa16.62■□□□□ 0.25
CDK11A-220ENST00000492390 FNDC3AQ9Y2H6 1198 aaKnown RBP16.62■□□□□ 0.25
CDK11A-220ENST00000492390 KNTC1P50748 2209 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 GOLGA8CPA6NN73 597 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 TNFSF14O43557 240 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 FAM13AO94988 1023 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 ABL1P00519 1130 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 ITGB3P05106 788 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 MBL2P11226 248 aaPredicted RBP16.61■□□□□ 0.25
CDK11A-220ENST00000492390 BDNFP23560 247 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 CMA1P23946 247 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 EIF2S3P41091 472 aaKnown RBP16.61■□□□□ 0.25
CDK11A-220ENST00000492390 ZNF131P52739 623 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 GRIN1Q05586 938 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
CDK11A-220ENST00000492390 HLA-BQ31612 363 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 RESP18Q5W5W9 173 aa16.61■□□□□ 0.25
CDK11A-220ENST00000492390 EGFLAMQ63HQ2 1017 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms