RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SOX5P35711 763 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 USP8P40818 1118 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 BPIFB4P59827 614 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 TPM4P67936 248 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 GPC5P78333 572 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 GRM2Q14416 872 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 FILIP1LQ4L180 1135 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 HECTD3Q5T447 861 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 KLHDC10Q6PID8 442 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 NEK11Q8NG66 645 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 BPIFB1Q8TDL5 484 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 DNASE1L2Q92874 299 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 ULBP1Q9BZM6 244 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 LHX5Q9H2C1 402 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CCSER2Q9H7U1 834 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 NLRC4Q9NPP4 1024 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CNGB3Q9NQW8 809 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CLIC5Q9NZA1 410 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 WNT16Q9UBV4 365 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 NOCTQ9UK39 431 aaKnown RBP19.62■□□□□ 0.73
PTCD3-217ENST00000488801 ATG2BQ96BY7 2078 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 A0A1W2PQH9 124 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 GOLGA6L19H0YKK7 550 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 CHADO15335 359 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 TLR5O60602 858 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 GPR37L1O60883 481 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 ZBED1O96006 694 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 DAOAP59103 153 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 NOP9Q86U38 636 aaKnown RBP19.61■□□□□ 0.73
PTCD3-217ENST00000488801 WDTC1Q8N5D0 677 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 BAP1Q92560 729 aa19.61■□□□□ 0.73
PTCD3-217ENST00000488801 TRMT61BQ9BVS5 477 aaKnown RBP19.61■□□□□ 0.73
PTCD3-217ENST00000488801 MYO18AQ92614 2054 aaKnown RBP19.61■□□□□ 0.73
PTCD3-217ENST00000488801 SHISA7A6NL88 538 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 SERPINC1P01008 464 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 RGS7P49802 495 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 PDCLQ13371 301 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 ARHGAP29Q52LW3 1261 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 FIGNQ5HY92 759 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 IER5LQ5T953 404 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 BMP8AQ7Z5Y6 402 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 GPIHBP1Q8IV16 184 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 FAM83CQ9BQN1 747 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 LRRC4Q9HBW1 653 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 MYO6Q9UM54 1294 aa19.6■□□□□ 0.73
PTCD3-217ENST00000488801 KRBA1A5PL33 1030 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 DPYSL4O14531 572 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 MTF1Q14872 753 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 TMEM110Q86TL2 294 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 SIX6OS1Q8N1H7 587 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 ARHGAP18Q8N392 663 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 OLIG1Q8TAK6 271 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 SH3RF2Q8TEC5 729 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 IRGQQ8WZA9 623 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 IRF7Q92985 503 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 SPAG5Q96R06 1193 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 CPQQ9Y646 472 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 DOCK4Q8N1I0 1966 aa19.59■□□□□ 0.73
PTCD3-217ENST00000488801 FANCMQ8IYD8 2048 aa19.58■□□□□ 0.73
PTCD3-217ENST00000488801 TMEM221A6NGB7 291 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 YJEFN3A6XGL0 299 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 E7ENQ6 273 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 M0R296 226 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 LEFTY2O00292 366 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 GREM1O60565 184 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 GFPT2O94808 682 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 FBXO21O94952 628 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 RARGP13631 454 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 GDI1P31150 447 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 STAT1P42224 750 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 ACADSBP45954 432 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 YWHAGP61981 247 aaKnown RBP eCLIP19.58■□□□□ 0.72
PTCD3-217ENST00000488801 PLCB2Q00722 1185 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 PFKPQ01813 784 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 ZNF677Q86XU0 584 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 NDRG1Q92597 394 aaKnown RBP19.58■□□□□ 0.72
PTCD3-217ENST00000488801 DDX23Q9BUQ8 820 aaKnown RBP19.58■□□□□ 0.72
PTCD3-217ENST00000488801 C1QTNF1Q9BXJ1 281 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 ARHGEF3Q9NR81 526 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 NAGPAQ9UK23 515 aa19.58■□□□□ 0.72
PTCD3-217ENST00000488801 CACNA1IQ9P0X4 2223 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 E5RJQ4 531 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 PAPSS1O43252 624 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 TBX18O95935 607 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 ABL1P00519 1130 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 MBL2P11226 248 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 CHRNB2P17787 502 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 MLLT6P55198 1093 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 UBASH3AP57075 661 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 FMO1Q01740 532 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 HFE2Q6ZVN8 426 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 DDX42Q86XP3 938 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 PASD1Q8IV76 773 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 C1orf131Q8NDD1 294 aaKnown RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 CLEC4CQ8WTT0 213 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 SLC20A1Q8WUM9 679 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 CPXM1Q96SM3 734 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms