RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 UBE2Q2Q8WVN8 375 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 GRAMD1AQ96CP6 724 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 CHFRQ96EP1 664 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 FAM227BQ96M60 508 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 CRB3Q9BUF7 120 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 STK33Q9BYT3 514 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 IKZF4Q9H2S9 585 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TM7SF3Q9NS93 570 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 SERTAD4Q9NUC0 356 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 DMRT1Q9Y5R6 373 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 CES2O00748 559 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 KCNQ3O43525 872 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PLA2G6O60733 806 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 NPSP0C0P6 89 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 FAM163BP0C2L3 166 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 ELFN1P0C7U0 828 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 JUPP14923 745 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 CD19P15391 556 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PECAM1P16284 738 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 EGR1P18146 543 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PROZP22891 400 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 MST1P26927 711 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 IL6STP40189 918 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 EEFSECP57772 596 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 SUMO2P61956 95 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 E2F1Q01094 437 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PCID2Q5JVF3 399 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 RAP1GAP2Q684P5 730 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PGBD2Q6P3X8 592 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 ANKRD16Q6P6B7 361 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 KIAA0408Q6ZU52 694 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 Q6ZWC4 215 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 WDR53Q7Z5U6 358 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 RASAL3Q86YV0 1011 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 SIRT6Q8N6T7 355 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 ENAHQ8N8S7 591 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 ZNF527Q8NB42 609 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 ABHD11Q8NFV4 315 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 RP9Q8TA86 221 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 IPO4Q8TEX9 1081 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 POF1BQ8WVV4 589 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 C18orf8Q96DM3 657 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 RSPRY1Q96DX4 576 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 SORCS2Q96PQ0 1159 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 PRR25Q96S07 402 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 MRIQ9BWK5 157 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 WDR12Q9GZL7 423 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 CPNE5Q9HCH3 593 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 IL17RBQ9NRM6 502 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 DUSP22Q9NRW4 184 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 DLL3Q9NYJ7 618 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 SLC17A6Q9P2U8 582 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 NKX1-2Q9UD57 310 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 STEAP1Q9UHE8 339 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 KAT6AQ92794 2004 aa4.54□□□□□ -1.68
ECHDC1-217ENST00000488087 A0A087WV62 115 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 H0YIZ8 118 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 OVOL3O00110 214 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 KIAA0355O15063 1070 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ZSCAN9O15535 394 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 FFAR2O15552 330 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 PMPCBO75439 489 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 LMNAP02545 664 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 SRGAP2BP0DMP2 458 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 CREB1P16220 341 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 PCSK6P29122 969 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 CTGFP29279 349 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 GKP32189 559 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 RAB30Q15771 203 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 CYP1B1Q16678 543 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 SLC5A9Q2M3M2 681 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 TBC1D25Q3MII6 688 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ARHGAP15Q53QZ3 475 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 PRR16Q569H4 304 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 L1TD1Q5T7N2 865 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 EXOC8Q8IYI6 725 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 METTL25Q8N6Q8 603 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 SIMC1Q8NDZ2 872 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 NGDNQ8NEJ9 315 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 MBD3L2Q8NHZ7 208 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 CYP2W1Q8TAV3 490 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ABHD5Q8WTS1 349 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ZDHHC12Q96GR4 267 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 VPS50Q96JG6 964 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 NECTIN3Q9NQS3 549 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ASB6Q9NWX5 421 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 VPS51Q9UID3 782 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 AMFRQ9UKV5 643 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 RIMKLBQ9ULI2 386 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 ADAMTS5Q9UNA0 930 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 SLC27A6Q9Y2P4 619 aa4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 POLR2AP24928 1970 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-217ENST00000488087 LOC102724159A0A0B4J2E5 919 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 IFRD1O00458 451 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 PIP5K1BO14986 540 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms