RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 CD99L2Q8TCZ2 262 aa17.29■□□□□ 0.36
PCCB-217ENST00000484181 CENPIQ92674 756 aaPredicted RBP17.29■□□□□ 0.36
PCCB-217ENST00000484181 RNF157Q96PX1 679 aa17.29■□□□□ 0.36
PCCB-217ENST00000484181 ADAM2Q99965 735 aa17.29■□□□□ 0.36
PCCB-217ENST00000484181 SNRNP25Q9BV90 132 aaKnown RBP17.29■□□□□ 0.36
PCCB-217ENST00000484181 KRT82Q9NSB4 513 aa17.29■□□□□ 0.36
PCCB-217ENST00000484181 NOVA2Q9UNW9 492 aaKnown RBP17.29■□□□□ 0.36
PCCB-217ENST00000484181 GRIN2DO15399 1336 aa17.29■□□□□ 0.36
PCCB-217ENST00000484181 SRRM3A6NNA2 597 aaPredicted RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 TP73O15350 636 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 HCRTO43612 131 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 ABHD2P08910 425 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 CD48P09326 243 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 RBP3P10745 1247 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 TKTP29401 623 aaKnown RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 HPDP32754 393 aaPredicted RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 TUSC3Q13454 348 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 KCTD19Q17RG1 926 aaPredicted RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 CENPUQ71F23 418 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 PPIL6Q8IXY8 311 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 FAM149B1Q96BN6 582 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 SMARCD1Q96GM5 515 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 SERPINB12Q96P63 405 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 RBM15Q96T37 977 aaKnown RBP eCLIP17.28■□□□□ 0.364e-6■■□□□ 13.6
PCCB-217ENST00000484181 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 PPCSQ9HAB8 311 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 PCDH18Q9HCL0 1135 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 AAASQ9NRG9 546 aa17.28■□□□□ 0.36
PCCB-217ENST00000484181 RCOR3Q9P2K3 495 aaPredicted RBP17.28■□□□□ 0.36
PCCB-217ENST00000484181 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 MEIS3P2A8K0S8 358 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 EIF3HO15372 352 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCCB-217ENST00000484181 ACSL3O95573 720 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 ACAT1P24752 427 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 CHKAP35790 457 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 HDAC4P56524 1084 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 BCAR1P56945 870 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 MRPS5P82675 430 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 TAF5Q15542 800 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 MAPRE1Q15691 268 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 DPYSL2Q16555 572 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 ANKRD20A8PQ5CZ79 823 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 SH3PXD2AQ5TCZ1 1133 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 MFSD5Q6N075 450 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 C4orf22Q6V702 233 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 CYP4V2Q6ZWL3 525 aaPredicted RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 FAM35AQ86V20 835 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 KHSRPQ92945 711 aaKnown RBP eCLIP17.27■□□□□ 0.363e-9■■■□□ 16.1
PCCB-217ENST00000484181 TLCD1Q96CP7 247 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 C11orf84Q9BUA3 381 aaPredicted RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 TRIM62Q9BVG3 475 aa17.27■□□□□ 0.36
PCCB-217ENST00000484181 TRMT13Q9NUP7 481 aaKnown RBP17.27■□□□□ 0.36
PCCB-217ENST00000484181 INPPL1O15357 1258 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 SHBGP04278 402 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 NOS2P35228 1153 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 SULT1E1P49888 294 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 IRAK1P51617 712 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 AIF1P55008 147 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 MAGOHP61326 146 aaKnown RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 STAT4Q14765 748 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 ZSCAN26Q16670 478 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 RNASEH2BQ5TBB1 312 aaKnown RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 PPP1R21Q6ZMI0 780 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 CLEC20AQ6ZU45 233 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 BZW1Q7L1Q6 419 aaKnown RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 CDKL3Q8IVW4 592 aaPredicted RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 FAF2Q96CS3 445 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 HMX1Q9NP08 348 aaPredicted RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 CNGB3Q9NQW8 809 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 RRN3Q9NYV6 651 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 AP4E1Q9UPM8 1137 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 TLDC2A0PJX2 215 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 H7C0C1 242 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 TRPA1O75762 1119 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 TCEA3O75764 348 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 AP1G2O75843 785 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 B3GAT3O94766 335 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 EOMESO95936 686 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 CYP11A1P05108 521 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 MAP2K2P36507 400 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 ARL4AP40617 200 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 MDH1P40925 334 aaKnown RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 ATP5OP48047 213 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 NR2C2P49116 596 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 ARL4CP56559 192 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 THEM5Q8N1Q8 247 aa17.26■□□□□ 0.35
PCCB-217ENST00000484181 RIBC1Q8N443 379 aaPredicted RBP17.26■□□□□ 0.35
PCCB-217ENST00000484181 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms