RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DNAJC21Q5F1R6 531 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 CLLU1OSQ5K130 101 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 DRICH1Q6PGQ1 229 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 NPNTQ6UXI9 565 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 DSTYKQ6XUX3 929 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 HFE2Q6ZVN8 426 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 BBS12Q6ZW61 710 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 GSTA5Q7RTV2 222 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPATCH11Q8N954 259 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 HSFY1Q96LI6 401 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SMOQ99835 787 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 PABPC3Q9H361 631 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 KRT82Q9NSB4 513 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 WHRNQ9P202 907 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 EFR3BQ9Y2G0 817 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 CDH23Q9H251 3354 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 EYSQ5T1H1 3165 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 FRMPD3Q5JV73 1810 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 GOLGA6CA6NDK9 693 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 DCDC2CA8MYV0 355 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 NRP1O14786 923 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 PRPSAP2O60256 369 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 DDHD2O94830 711 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 MAP3K6O95382 1288 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 GOLGA6DP0CG33 693 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ITIH2P19823 946 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CETN2P41208 172 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 RAB27AP51159 221 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 VCPP55072 806 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 PLCB3Q01970 1234 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CALCOCO2Q13137 446 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 P3H1Q32P28 736 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 OTUD1Q5VV17 481 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SYPL2Q5VXT5 272 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZNF365Q70YC5 407 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CCDC25Q86WR0 208 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZDHHC17Q8IUH5 632 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ALLCQ8N6M5 410 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 OR10T2Q8NGX3 314 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 UHMK1Q8TAS1 419 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 GRK7Q8WTQ7 553 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CENPIQ92674 756 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 NKD2Q969F2 451 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SNF8Q96H20 258 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 PAWRQ96IZ0 340 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SYT15Q9BQS2 421 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 DDX23Q9BUQ8 820 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SNRNP25Q9BV90 132 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMLHEQ9NVH6 421 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 GOLGA6AQ9NYA3 693 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 FEZ2Q9UHY8 353 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ARVCFO00192 962 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 OPA1O60313 960 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 NBNO60934 754 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 IFNB1P01574 187 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 FYNP06241 537 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 ATF2P15336 505 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 LHX1P48742 406 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TUSC3Q13454 348 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SYDE1Q6ZW31 735 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMEM86AQ8N2M4 240 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CCDC185Q8N715 623 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 PQLC3Q8N755 202 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 CCDC89Q8N998 374 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TBCBQ99426 244 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 SQORQ9Y6N5 450 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 TET1Q8NFU7 2136 aa9.23□□□□□ -0.93
CDC42SE1-204ENST00000483763 YJEFN3A6XGL0 299 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 E7ENQ6 273 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 AMHP03971 560 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 ITGAVP06756 1048 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 RARGP13631 454 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 CDK7P50613 346 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 TKTL1P51854 596 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GRIK3Q13003 919 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 TCTN1Q2MV58 587 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 DCAF6Q58WW2 860 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC24A5Q71RS6 500 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM35AQ86V20 835 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 RFX6Q8HWS3 928 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 UNC45BQ8IWX7 931 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 DEFB106AQ8N104 65 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PLD5Q8N7P1 536 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MYCBPAPQ8TBZ2 947 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 RSPH1Q8WYR4 309 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM149B1Q96BN6 582 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 MED10Q9BTT4 135 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 CENPHQ9H3R5 247 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMBIM4Q9HC24 238 aa9.22□□□□□ -0.93
CDC42SE1-204ENST00000483763 PCDH18Q9HCL0 1135 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms