RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 LRRC8BQ6P9F7 803 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 UBR7Q8N806 425 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 PPCSQ9HAB8 311 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 SLC9A2Q9UBY0 812 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 ZNF180Q9UJW8 692 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 A0A0B4J269 797 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 VWA5AO00534 786 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 ITGBL1O95965 494 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 ATP6V1B1P15313 513 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 RGS2P41220 211 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 HIPK4Q8NE63 616 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 THTPAQ9BU02 230 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 TLE6Q9H808 572 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 SSU72Q9NP77 194 aaKnown RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 PDE5AO76074 875 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PIGHQ14442 188 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 MAP7D1Q3KQU3 841 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 MMEL1Q495T6 779 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 DUS1LQ6P1R4 473 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 LRRC6Q86X45 466 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ARFGAP1Q8N6T3 406 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 CLPTM1LQ96KA5 538 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TRIM55Q9BYV6 548 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TAS2R1Q9NYW7 299 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TRIM43BA6NCK2 446 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 MAFGO15525 162 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TMEM63AO94886 807 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ENO1P06733 434 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PABPC4LP0CB38 370 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 IL1R2P27930 398 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PHBP35232 272 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 RPL22P35268 128 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TNFSF9P41273 254 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 NRLP54845 237 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ARL4CP56559 192 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 DEPTORQ8TB45 409 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 CCDC110Q8TBZ0 833 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 DCAKDQ8WVC6 231 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TFAP2BQ92481 460 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 PRR11Q96HE9 360 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TUBB6Q9BUF5 446 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 C2orf71A6NGG8 1288 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ARHGAP42A6NI28 874 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 CST8O60676 142 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 E2F6O75461 281 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 XKR3Q5GH77 459 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 SLFN12LQ6IEE8 588 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 XRRA1Q6P2D8 792 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 MANSC1Q9H8J5 431 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
CCDC78-213ENST00000482878 BARX2Q9UMQ3 279 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-213ENST00000482878 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
CCDC78-213ENST00000482878 PIGRP01833 764 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 CD48P09326 243 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF24P17028 368 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 MYL6P60660 151 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 OSTNP61366 133 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 KDSRQ06136 332 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF398Q8TD17 642 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 HSPBAP1Q96EW2 488 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 PORCNQ9H237 461 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 FETUBQ9UGM5 382 aa12.89□□□□□ -0.35
CCDC78-213ENST00000482878 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms