RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MRGPRX1Q96LB2 322 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 SLITRK1Q96PX8 696 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 ACOX2Q99424 681 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 MIR1-1HGQ9H1L0 117 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 SPHK2Q9NRA0 654 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.93■□□□□ 0.14
HDAC6-224ENST00000481929 ITGA11Q9UKX5 1188 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 FNDC3AQ9Y2H6 1198 aaKnown RBP15.93■□□□□ 0.14
HDAC6-224ENST00000481929 SH3BP1Q9Y3L3 701 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 PCDHGB2Q9Y5G2 931 aa15.93■□□□□ 0.14
HDAC6-224ENST00000481929 FAM149AA5PLN7 773 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 E9PAM4 449 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 NCAM1P13591 858 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 TAF10Q12962 218 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 POSTNQ15063 836 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 SOWAHAQ2M3V2 549 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 TDRD10Q5VZ19 366 aaKnown RBP15.92■□□□□ 0.14
HDAC6-224ENST00000481929 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 GABRG3Q99928 467 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 SLC6A17Q9H1V8 727 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 CRTAC1Q9NQ79 661 aa15.92■□□□□ 0.14
HDAC6-224ENST00000481929 DNAJC17Q9NVM6 304 aaKnown RBP15.92■□□□□ 0.14
HDAC6-224ENST00000481929 PTPRQQ9UMZ3 2332 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 F8VP50 259 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 TRIM24O15164 1050 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 HLA-EP13747 358 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 ITPKBP27987 946 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 NEK4P51957 841 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 WNT7BP56706 349 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 HMGN5P82970 282 aaKnown RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 RBP5P82980 135 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 SUZ12Q15022 739 aaKnown RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 HLA-BQ31612 363 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 DBX2Q6ZNG2 339 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 LRRC69Q6ZNQ3 347 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 DPH6Q7L8W6 267 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 BBS7Q8IWZ6 715 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 SCFD1Q8WVM8 642 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 TOE1Q96GM8 510 aaKnown RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 C8orf48Q96LL4 319 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 FAM213AQ9BRX8 229 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 PRORYQ9H606 182 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 WSB2Q9NYS7 404 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 R3HCC1Q9Y3T6 440 aaKnown RBP15.91■□□□□ 0.14
HDAC6-224ENST00000481929 RAD54BQ9Y620 910 aa15.91■□□□□ 0.14
HDAC6-224ENST00000481929 KNTC1P50748 2209 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CABIN1Q9Y6J0 2220 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CAPN9O14815 690 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 BCAT2O15382 392 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 LMO2P25791 158 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 ADSSP30520 456 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 IFRD2Q12894 506 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 MYO1EQ12965 1108 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 SMAD1Q15797 465 aaKnown RBP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CCDC157Q569K6 752 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 TMEM25Q86YD3 366 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 ZNF843Q8N446 348 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 PDZD8Q8NEN9 1154 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CADM4Q8NFZ8 388 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CXorf38Q8TB03 319 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 KBTBD7Q8WVZ9 684 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 PCED1BQ96HM7 432 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 ZFRQ96KR1 1074 aaKnown RBP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 GPR174Q9BXC1 333 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 IKZF4Q9H2S9 585 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 ST6GALNAC4Q9H4F1 302 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.9■□□□□ 0.14
HDAC6-224ENST00000481929 KNL1Q8NG31 2342 aa15.9■□□□□ 0.14
HDAC6-224ENST00000481929 CYSRT1A8MQ03 144 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 J3QKU1 62 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 GFRA2O00451 464 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 COCHO43405 550 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 SLC26A4O43511 780 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 TNFSF14O43557 240 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 TMEM191BP0C7N4 346 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 BNC1Q01954 994 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 MDH1BQ5I0G3 518 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 DCAF12L1Q5VU92 463 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 LARP1BQ659C4 914 aaKnown RBP15.89■□□□□ 0.13
HDAC6-224ENST00000481929 SCARA3Q6AZY7 606 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 METTL3Q86U44 580 aaKnown RBP15.89■□□□□ 0.13
HDAC6-224ENST00000481929 ENGASEQ8NFI3 743 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 MYCBPAPQ8TBZ2 947 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 HVCN1Q96D96 273 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 NXPE2Q96DL1 559 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 SAAL1Q96ER3 474 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 FAM84AQ96KN4 292 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 FCRL3Q96P31 734 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-224ENST00000481929 XPO6Q96QU8 1125 aaKnown RBP15.89■□□□□ 0.13
HDAC6-224ENST00000481929 DUSP9Q99956 384 aaKnown RBP15.89■□□□□ 0.13
HDAC6-224ENST00000481929 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
HDAC6-224ENST00000481929 SIX4Q9UIU6 781 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms