RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 IMPG2Q9BZV3 1241 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 COMMD8Q9NX08 183 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 INVSQ9Y283 1065 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 SH3BP1Q9Y3L3 701 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 E2F8A0AVK6 867 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 HHLA1C9JL84 531 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 APBB3O95704 486 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 ADH5P11766 374 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 DGKEP52429 567 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 KDSRQ06136 332 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 SF3A2Q15428 464 aaKnown RBP19.62■□□□□ 0.73
CLK1-211ENST00000481641 EMC10Q5UCC4 262 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 CLEC20AQ6ZU45 233 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 BBS7Q8IWZ6 715 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 KIAA1958Q8N8K9 716 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 ERCC4Q92889 916 aaPredicted RBP19.62■□□□□ 0.73
CLK1-211ENST00000481641 PNKPQ96T60 521 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 NT5C1AQ9BXI3 368 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 NIF3L1Q9GZT8 377 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 NACA2Q9H009 215 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 SMOC1Q9H4F8 434 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 CYP3A43Q9HB55 503 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 TMEM8AQ9HCN3 771 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 ZDHHC4Q9NPG8 344 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 OSER1Q9NX31 292 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 TBC1D14Q9P2M4 693 aa19.62■□□□□ 0.73
CLK1-211ENST00000481641 CYP26A1O43174 497 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 TLR5O60602 858 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 CILPO75339 1184 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 ADH1CP00326 375 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 HNRNPLP14866 589 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLK1-211ENST00000481641 SDHBP21912 280 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 TUBP50607 506 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 PLK5Q496M5 336 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 ZNF394Q53GI3 561 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 FMR1NBQ8N0W7 255 aaPredicted RBP19.61■□□□□ 0.73
CLK1-211ENST00000481641 NAT16Q8N8M0 369 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 TSTD1Q8NFU3 115 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 TPSD1Q9BZJ3 242 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 FBXO44Q9H4M3 255 aa19.61■□□□□ 0.73
CLK1-211ENST00000481641 ABCA7Q8IZY2 2146 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 EPN2O95208 641 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 KAT7O95251 611 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 APODP05090 189 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 CHRM1P11229 460 aaPredicted RBP19.6■□□□□ 0.73
CLK1-211ENST00000481641 ACO1P21399 889 aaKnown RBP19.6■□□□□ 0.73
CLK1-211ENST00000481641 TIE1P35590 1138 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 PRCPP42785 496 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 EDRF1Q3B7T1 1238 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 KRT39Q6A163 491 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 TMEM92Q6UXU6 159 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 TTC30AQ86WT1 665 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 TMEM25Q86YD3 366 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 ALLCQ8N6M5 410 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 RTKNQ9BST9 563 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 DUSP15Q9H1R2 295 aaPredicted RBP19.6■□□□□ 0.73
CLK1-211ENST00000481641 NMUR1Q9HB89 426 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 ARHGEF4Q9NR80 690 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 TLR8Q9NR97 1041 aaKnown RBP19.6■□□□□ 0.73
CLK1-211ENST00000481641 RXFP3Q9NSD7 469 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 EBF1Q9UH73 591 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 NUDT5Q9UKK9 219 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 MMP17Q9ULZ9 603 aa19.6■□□□□ 0.73
CLK1-211ENST00000481641 MYO18AQ92614 2054 aaKnown RBP19.6■□□□□ 0.73
CLK1-211ENST00000481641 A0A1W2PQH9 124 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 MDM4O15151 490 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 KLF8O95600 359 aaPredicted RBP19.59■□□□□ 0.73
CLK1-211ENST00000481641 GAD2Q05329 585 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 PPP1R26Q5T8A7 1209 aaPredicted RBP19.59■□□□□ 0.73
CLK1-211ENST00000481641 ANO7Q6IWH7 933 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 PHTF2Q8N3S3 785 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 TXNDC5Q8NBS9 432 aaKnown RBP19.59■□□□□ 0.73
CLK1-211ENST00000481641 CCDC26Q8TAB7 109 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 NETO1Q8TDF5 533 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 TATDN2Q93075 761 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 LOXL4Q96JB6 756 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 ZC3H10Q96K80 434 aaKnown RBP19.59■□□□□ 0.73
CLK1-211ENST00000481641 ARID3AQ99856 593 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 KLF16Q9BXK1 252 aaPredicted RBP19.59■□□□□ 0.73
CLK1-211ENST00000481641 SCML2Q9UQR0 700 aa19.59■□□□□ 0.73
CLK1-211ENST00000481641 SGK1O00141 431 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 SLC30A4O14863 429 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 TRIM24O15164 1050 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 CETN3O15182 167 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 GREM1O60565 184 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 EPB41P11171 864 aaKnown RBP19.58■□□□□ 0.72
CLK1-211ENST00000481641 GTF2H1P32780 548 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 MXI1P50539 228 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 PMS1P54277 932 aaKnown RBP19.58■□□□□ 0.72
CLK1-211ENST00000481641 MCCD1P59942 119 aaPredicted RBP19.58■□□□□ 0.72
CLK1-211ENST00000481641 MRPS21P82921 87 aaKnown RBP19.58■□□□□ 0.72
CLK1-211ENST00000481641 ENPEPQ07075 957 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 CRY1Q16526 586 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 ANO4Q32M45 955 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.72
CLK1-211ENST00000481641 IL17RCQ8NAC3 791 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 CCDC150Q8NCX0 1101 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 ENGASEQ8NFI3 743 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 OTUB2Q96DC9 234 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 HEXIM2Q96MH2 286 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms