RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 VN1R3Q9BXE9 311 aa4.49□□□□□ -1.69
CBX3-207ENST00000481300 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
CBX3-207ENST00000481300 AS3MTQ9HBK9 375 aa4.49□□□□□ -1.69
CBX3-207ENST00000481300 DRG1Q9Y295 367 aaKnown RBP4.49□□□□□ -1.69
CBX3-207ENST00000481300 CCDC151A5D8V7 595 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 KIAA0355O15063 1070 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 URI1O94763 535 aaPredicted RBP4.48□□□□□ -1.69
CBX3-207ENST00000481300 ESRRBO95718 433 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 NR2F6P10588 404 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 CD19P15391 556 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 TYRP1P17643 537 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 YY1P25490 414 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 MST1P26927 711 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 RBL1P28749 1068 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 NSUN2Q08J23 767 aaKnown RBP eCLIP4.48□□□□□ -1.69
CBX3-207ENST00000481300 TXNRD1Q16881 649 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 CCDC142Q17RM4 750 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 LY6KQ17RY6 165 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 SLC5A9Q2M3M2 681 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 CCDC38Q502W7 563 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 ANO1Q5XXA6 986 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 RAP1GAP2Q684P5 730 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 KIAA0408Q6ZU52 694 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 RAB11FIP4Q86YS3 637 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 SMC5Q8IY18 1101 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 FSTL5Q8N475 847 aaPredicted RBP4.48□□□□□ -1.69
CBX3-207ENST00000481300 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 ACTRT2Q8TDY3 377 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 IPO4Q8TEX9 1081 aaKnown RBP4.48□□□□□ -1.69
CBX3-207ENST00000481300 ABHD5Q8WTS1 349 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 LINC00476Q8WZB0 136 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 GDF15Q99988 308 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 PPCSQ9HAB8 311 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 SH2B3Q9UQQ2 575 aa4.48□□□□□ -1.69
CBX3-207ENST00000481300 EPN1Q9Y6I3 576 aaPredicted RBP4.48□□□□□ -1.69
CBX3-207ENST00000481300 VWC2LB2RUY7 222 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ADM5C9JUS6 153 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 PIP5K1BO14986 540 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 VNN1O95497 513 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 TTLL1O95922 423 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 CSTBP04080 98 aaKnown RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 SRGAP2BP0DMP2 458 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 PECAM1P16284 738 aaPredicted RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 NDUFB7P17568 137 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 NTSR1P30989 418 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 SLC5A2P31639 672 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 CHKAP35790 457 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 SEC24CP53992 1094 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 TPTEP56180 551 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
CBX3-207ENST00000481300 FOXI1Q12951 378 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ZRSR2Q15696 482 aaKnown RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 PFKFB4Q16877 469 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ZACNQ401N2 412 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ARHGAP15Q53QZ3 475 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 KIAA0895LQ68EN5 471 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ERAP2Q6P179 960 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 CLEC9AQ6UXN8 241 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 TTC30AQ86WT1 665 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ADGRG3Q86Y34 549 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 GATAD2AQ86YP4 633 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 MBD3L2Q8NHZ7 208 aaPredicted RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 CCT6BQ92526 530 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 SLC9A6Q92581 669 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 OBP2BQ9NPH6 170 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 ARHGEF3Q9NR81 526 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 DKK3Q9UBP4 350 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 NKX1-2Q9UD57 310 aaPredicted RBP4.47□□□□□ -1.69
CBX3-207ENST00000481300 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 CA14Q9ULX7 337 aa4.47□□□□□ -1.69
CBX3-207ENST00000481300 WDR27A2RRH5 827 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 LGALS16A8MUM7 142 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 EXOC5O00471 708 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 ZSCAN9O15535 394 aaPredicted RBP4.46□□□□□ -1.7
CBX3-207ENST00000481300 NBNO60934 754 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 GLP2RO95838 553 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 VIPP01282 170 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 ERBB2P04626 1255 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 PRKCBP05771 671 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 DLDP09622 509 aaKnown RBP4.46□□□□□ -1.7
CBX3-207ENST00000481300 MPLP40238 635 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 GRIA3P42263 894 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 TIRAPP58753 221 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 SUMO2P61956 95 aaKnown RBP4.46□□□□□ -1.7
CBX3-207ENST00000481300 SPARCL1Q14515 664 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 PRR16Q569H4 304 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 TMTC4Q5T4D3 741 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 ABLIM2Q6H8Q1 611 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 PEG10Q86TG7 708 aaKnown RBP4.46□□□□□ -1.7
CBX3-207ENST00000481300 RASGRP3Q8IV61 690 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 ATG16L2Q8NAA4 619 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 RFKQ969G6 155 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 TRIM63Q969Q1 353 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms