RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MAGEB2O15479 319 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 PDGFRBP09619 1106 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 MCF2P10911 925 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ALADP13716 330 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 CCNB1P14635 433 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 YY1P25490 414 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 GRIA1P42261 906 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 RIPK1Q13546 671 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 KRT81Q14533 505 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 SEPT7Q16181 437 aaKnown RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 FAM172AQ8WUF8 416 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 C10orf82Q8WW14 230 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 DHRS4Q9BTZ2 278 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ADARB2Q9NS39 739 aaKnown RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 SLC24A2Q9UI40 661 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 OTOFQ9HC10 1997 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 BPTFQ12830 3046 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 E7ESA3 106 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 PRPSAP2O60256 369 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ENTPD5O75356 428 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 NPTXRO95502 500 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 PYGBP11216 843 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 NOMO1Q15155 1222 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 MARCH8Q5T0T0 291 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 TRIM68Q6AZZ1 485 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 LONP2Q86WA8 852 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 BANPQ8N9N5 519 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 TTC13Q8NBP0 860 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 C16orf70Q9BSU1 422 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 CNPY3Q9BT09 278 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 TBC1D10AQ9BXI6 508 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 ZNF395Q9H8N7 513 aaPredicted RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 FBXO6Q9NRD1 293 aaPredicted RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 NOP53Q9NZM5 478 aaKnown RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 SMG5Q9UPR3 1016 aaKnown RBP11.26□□□□□ -0.61
VPS52-217ENST00000478934 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 USH1CQ9Y6N9 552 aa11.26□□□□□ -0.61
VPS52-217ENST00000478934 PAPSS1O43252 624 aaPredicted RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 ENDOD1O94919 500 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 AKAP5P24588 427 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 SLC10A2Q12908 348 aaPredicted RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 NR1H3Q13133 447 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PTK7Q13308 1070 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 BMPR2Q13873 1038 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 KCNJ11Q14654 390 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 RFWD3Q6PCD5 774 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 NLRP9Q7RTR0 991 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PCGF5Q86SE9 256 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CTAGE3PQ8IX95 158 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 MPP5Q8N3R9 675 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 LINC01465Q8N7H1 131 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 TTC17Q96AE7 1141 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 SLC7A6OSQ96CW6 309 aaPredicted RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 FAM111AQ96PZ2 611 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 SNRNP25Q9BV90 132 aaKnown RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 SMYD2Q9NRG4 433 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 TEX264Q9Y6I9 313 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CXCL11O14625 94 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 ADCY6O43306 1168 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 APRTP07741 180 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CCDC130P13994 396 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 ATP2A2P16615 1042 aaKnown RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 PAX7P23759 505 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 LMO2P25791 158 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 ADORA2AP29274 412 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 PHBP35232 272 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 RABGGTBP53611 331 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
VPS52-217ENST00000478934 SESN3P58005 492 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 GBE1Q04446 702 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 ACVR2BQ13705 512 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 LCLAT1Q6UWP7 414 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 OLFML1Q6UWY5 402 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CEP128Q6ZU80 1094 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 RFX8Q6ZV50 586 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
VPS52-217ENST00000478934 UNC5BQ8IZJ1 945 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms